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BaseInfo

ncRNA ID	novel_zma_miR783
Species	Zea mays
Class	miRNA
Genome position	Chr2:145506898-145507007 [+]
Reference genome	RefGen_v4
Source	SRR2089709;SRR2089710;SRR2287161;SRR2287163;SRR5451004;SRR2089698;SRR2089699;SRR2089700;SRR2089704;SRR2089705;SRR2089708
Length	24
Mature sequence(if miRNA)	1 - AGGGGUGGAUUGAGGGGGAUUGGA - 24
Stem-loop(if miRNA)	--                                                    U   AGGGGUGGAUUGAGGGGGAUUGGAGUGGAUUAAAUGCCCUCCUAUUCAAAUU U   ||||||||||||||||||||||||||||||||||||||||||||||||||||   UCCCCACCUAACUCCCCCUAACCUCACCUAAUUUACGGGAGGAUAAGUUUAA C AA                                                    A
Stem-loop sequence	AGGGGUGGAUUGAGGGGGAUUGGAGUGGAUUAAAUGCCCUCCUAUUCAAAUUUUCAAAUUUGAAUAGGAGGGCAUUUAAUCCACUCCAAUCCCCCUCAAUCCACCCCUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020552749.1	ncRNA:24   AGGUUAGGGGGAGUUAGGUGGGGA   1   |||||||||||||||||||||||| targets:3278   UCCAAUCCCCCUCAAUCCACCCCU   3301 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC103654236 (LOC103654236), mRNA	NA	coding protein	psRNATarget
XM_008661613.2	ncRNA:24   AGGUUAGGGGGAGUUAGGUGGGGA   1   |||||||||=|||||||||||||| targets:3046   UCCAAUCCCUCUCAAUCCACCCCU   3069 Target Full Sequence	1.0	PREDICTED: Zea mays two-component response regulator ORR25 (LOC103638799), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008661611.2	ncRNA:24   AGGUUAGGGGGAGUUAGGUGGGGA   1   |||||||||=|||||||||||||| targets:3051   UCCAAUCCCUCUCAAUCCACCCCU   3074 Target Full Sequence	1.0	PREDICTED: Zea mays two-component response regulator ORR25 (LOC103638799), transcript variant X1, mRNA	NA	coding protein	psRNATarget
NM_001176181.1	ncRNA:24   AGGUUAGGGGGAGUUAGGUGGGGA   1   |||||||||||||||||||||=|* targets:1599   UCCAAUCCCCCUCAAUCCACCUCA   1622 Target Full Sequence	2.5	Zea mays uncharacterized LOC100383533 (LOC100383533), mRNA	NA	coding protein	psRNATarget
BT067503.1	ncRNA:24   AGGUUAGGGGGAGUUAGGUGGGGA   1   |||||||||||||||||||||=|* targets:1599   UCCAAUCCCCCUCAAUCCACCUCA   1622 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0066C23 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020552750.1	ncRNA:24   AGGUUAGGGGGAGUUAGGUGGGGA   1   ||=||||||=|||||||||||=|| targets:144   UCUAAUCCCUCUCAAUCCACCUCU   167 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103654238 (LOC103654238), mRNA	NA	coding protein	psRNATarget
BT017648.1	ncRNA:24   AGGUUAGGGGGAGUUAGGUGGGGA   1   *=||||===||||||||||||||| targets:217   CUCAAUUUUCCUCAAUCCACCCCU   240 Target Full Sequence	3.0	Zea mays clone EL01N0439D04.c mRNA sequence	NA	coding protein	psRNATarget
BT069484.1	ncRNA:24   AGGUUAGGGGGAGUUAGGUGGGGA   1   *|*|||=|==|||||||||||||| targets:1169   GCAAAUUCUUCUCAAUCCACCCCU   1192 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0143K13 mRNA, complete cds	NA	coding protein	psRNATarget
BT018770.1	ncRNA:24   AGGUUAGGGGGAGUUAGGUGGGGA   1   *|*|||=|==|||||||||||||| targets:1306   GCAAAUUCUUCUCAAUCCACCCCU   1329 Target Full Sequence	3.0	Zea mays clone EL01N0525C10.d mRNA sequence	NA	coding protein	psRNATarget
EU965598.1	ncRNA:24   AGGUUAGGGGGAGUUAGGUGGGGA   1   *|*|||=|==|||||||||||||| targets:1358   GCAAAUUCUUCUCAAUCCACCCCU   1381 Target Full Sequence	3.0	Zea mays clone 287294 calcineurin B-like protein 4 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001156604.1	ncRNA:24   AGGUUAGGGGGAGUUAGGUGGGGA   1   *|*|||=|==|||||||||||||| targets:1358   GCAAAUUCUUCUCAAUCCACCCCU   1381 Target Full Sequence	3.0	Zea mays calcineurin B-like2 (si496006g11), mRNA	NA	coding protein	psRNATarget