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BaseInfo

ncRNA ID novel_zma_miR782
Species Zea mays
Class miRNA
Genome position Chr1:120929581-120929657 [+]
Reference genome RefGen_v4
Source SRR2089709;SRR2089712
Length 24
Mature sequence(if miRNA) 54 - CUUAAGUUAGAAUAAUUUGGGCGG - 77
Stem-loop(if miRNA) ---GG          CG          ----   G UG  U
     CGGGUUAUUC  AUUUAAGUGU    GUC U  CC C
     ||||||||||  ||||||||||    ||| |  || U
     GUUUAAUAAG  UGAAUUCACG    CAG G  GG A
GGCGG          AU          GGUU   - GU  A
Stem-loop sequence GGCGGGUUAUUCCGAUUUAAGUGUGUCGUUGCCUCUAAGGUGGGACUUGGGCACUUAAGUUAGAAUAAUUUGGGCGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT084202.2
ncRNA:24   GGCGGGUUUAAUAAGAUUGAAUUC   1
  |=|||||||||||||*||||||||
targets:343   CUGCCCAAAUUAUUCCAACUUAAG   366

1.5 Zea mays full-length cDNA clone ZM_BFb0088N15 mRNA, complete cds NA coding protein psRNATarget