Search result

BaseInfo

ncRNA ID novel_zma_miR780
Species Zea mays
Class miRNA
Genome position Chr1:112378825-112379013 [+]
Reference genome RefGen_v4
Source SRR2089709;SRR2089710;SRR2089711;SRR2089713;SRR2089715;SRR2089703;SRR2089705;SRR2089706;SRR2089707;SRR2089708
Length 24
Mature sequence(if miRNA) 166 - ACGUACUCGACAAAGGGACUGGCA - 189
Stem-loop(if miRNA) --      A           --   -----                --UA           G  A    A     A             ----  ACACUU
  CUAGUC UUUUGUCGAGU  GUU     ACGCUCGGCAAAGAGG    CUUUGUCGAGU CU GGAC AUAGC CUCGACAAAGAAG    GC      C
  |||||| |||||||||||  |||     ||||||||||||||||    ||||||||||| || |||| ||||| |||||||||||||    ||
  GGUCAG GAAACAGCUCA  CAA     UGUGAGCCGUUUCUCU    GAAACAGCUCA GG UCUG UGUUG GAGUUGUUUCUUC    CG      A
AC      G           UG   CCCUC                UGGA           A  A    G     C             GAAA  ACCAAG
Stem-loop sequence CUAGUCAUUUUGUCGAGUGUUACGCUCGGCAAAGAGGUACUUUGUCGAGUGCUAGGACAAUAGCACUCGACAAAGAAGGCACACUUCAGAACCAGCAAAGCUUCUUUGUUGAGCGUUGUGGUCUAGGAACUCGACAAAGAGGUUCUCUUUGCCGAGUGUCUCCCAACGUACUCGACAAAGGGACUGGCA