ncRNA ID | novel_zma_miR780 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:112378825-112379013 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089709;SRR2089710;SRR2089711;SRR2089713;SRR2089715;SRR2089703;SRR2089705;SRR2089706;SRR2089707;SRR2089708 |
Length | 24 |
Mature sequence(if miRNA) | 166 - ACGUACUCGACAAAGGGACUGGCA - 189 |
Stem-loop(if miRNA) |
--      A           --   -----                --UA           G  A    A     A             ----  ACACUU   CUAGUC UUUUGUCGAGU  GUU     ACGCUCGGCAAAGAGG    CUUUGUCGAGU CU GGAC AUAGC CUCGACAAAGAAG    GC      C   |||||| |||||||||||  |||     ||||||||||||||||    ||||||||||| || |||| ||||| |||||||||||||    ||   GGUCAG GAAACAGCUCA  CAA     UGUGAGCCGUUUCUCU    GAAACAGCUCA GG UCUG UGUUG GAGUUGUUUCUUC    CG      A AC      G           UG   CCCUC                UGGA           A  A    G     C             GAAA  ACCAAG |
Stem-loop sequence | CUAGUCAUUUUGUCGAGUGUUACGCUCGGCAAAGAGGUACUUUGUCGAGUGCUAGGACAAUAGCACUCGACAAAGAAGGCACACUUCAGAACCAGCAAAGCUUCUUUGUUGAGCGUUGUGGUCUAGGAACUCGACAAAGAGGUUCUCUUUGCCGAGUGUCUCCCAACGUACUCGACAAAGGGACUGGCA |