ncRNA ID | novel_zma_miR780 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:112378825-112379013 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089709;SRR2089710;SRR2089711;SRR2089713;SRR2089715;SRR2089703;SRR2089705;SRR2089706;SRR2089707;SRR2089708 |
Length | 24 |
Mature sequence(if miRNA) | 166 - ACGUACUCGACAAAGGGACUGGCA - 189 |
Stem-loop(if miRNA) |
-- A -- ----- --UA G A A A ---- ACACUU CUAGUC UUUUGUCGAGU GUU ACGCUCGGCAAAGAGG CUUUGUCGAGU CU GGAC AUAGC CUCGACAAAGAAG GC C |||||| ||||||||||| ||| |||||||||||||||| ||||||||||| || |||| ||||| ||||||||||||| || GGUCAG GAAACAGCUCA CAA UGUGAGCCGUUUCUCU GAAACAGCUCA GG UCUG UGUUG GAGUUGUUUCUUC CG A AC G UG CCCUC UGGA A A G C GAAA ACCAAG |
Stem-loop sequence | CUAGUCAUUUUGUCGAGUGUUACGCUCGGCAAAGAGGUACUUUGUCGAGUGCUAGGACAAUAGCACUCGACAAAGAAGGCACACUUCAGAACCAGCAAAGCUUCUUUGUUGAGCGUUGUGGUCUAGGAACUCGACAAAGAGGUUCUCUUUGCCGAGUGUCUCCCAACGUACUCGACAAAGGGACUGGCA |