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BaseInfo

ncRNA ID novel_zma_miR762
Species Zea mays
Class miRNA
Genome position Chr1:57650374-57650455 [+]
Reference genome RefGen_v4
Source SRR2089709;SRR2089710;SRR2089711;SRR2089712;SRR2089713;SRR2089714;SRR2089715;SRR2287160;SRR2089698;SRR2089699;SRR2089700;SRR2089701;SRR2089702;SRR2089703;SRR2089704;SRR2089705;SRR2089706;SRR2089707;SRR2089708
Length 24
Mature sequence(if miRNA) 59 - GCGGAUACGGAAACGGGAGAGGGG - 82
Stem-loop(if miRNA) --  G             UC   -   -AU  --    CC  A
  CC CUCCCGUUUCCGU  CCG ACU   UC  CGGA  CG U
  || |||||||||||||  ||| |||   ||  ||||  ||
  GG GAGGGCAAAGGCA  GGC UGA   AG  GCCU  GC C
GG  A             UA   G   AAU  UA    UU  C
Stem-loop sequence CCGCUCCCGUUUCCGUUCCCGACUAUUCCGGACCCGAUCCCGUUUCCGAUGAUAAAGUGCGGAUACGGAAACGGGAGAGGGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020543912.1
ncRNA:24   GGGGAGAGGGCAAAGGCAUAGGCG   1
  ||||||||||||||||*|||||||
targets:5704   CCCCUCUCCCGUUUCCAUAUCCGC   5727

1.5 PREDICTED: Zea mays coronatine-insensitive protein homolog 2-like (LOC103638597), mRNA NA coding protein psRNATarget