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BaseInfo

ncRNA ID osa-miR416
Species Oryza sativa
Class miRNA
Genome position Chr4:17456166-17456274 [+]
Reference genome MSU7
Source miRBase
Length 21
Mature sequence(if miRNA) 87 - UGUUCGUCCGUACACUGUUCA - 107
Stem-loop(if miRNA)       G   ------       GAA    U    --     UAC   GG  G   A  
GAUGAG AGU      AUGAAUA   AGAA UAGA  AAAGC   GGU  UU UUG GCA
|||||| |||      |||||||   |||| ||||  |||||   |||  || ||| ||G
CUACUU UCA      UGCUUGU   UCUU GUCU  UUUCG   UCA  AA AAC CGC
      G   CAUGCC       --G    U    CG     -UC   AA  A   -  
Stem-loop sequence GAUGAGGAGUAUGAAUAGAAAGAAUUAGAAAAGCUACGGUGGUUGUUGAGCAGCGCCAAAAAAAACUCUGCUUUGCUCUGUUUCUGUGUUCGUCCGUACACUGUUCAUC

Reference

1 PMID:15345049
"Prediction and identification of Arabidopsis thaliana microRNAs and their mRNA targets";
Wang XJ, Reyes JL, Chua NH, Gaasterland T;
Genome Biol. 5:R65(2004).
2 PMID:16669754
"MicroRNAS and their regulatory roles in plants";
Jones-Rhoades MW, Bartel DP, Bartel B;
Annu Rev Plant Biol. 57:19-53(2006).