ncRNA ID | novel_zma_miR747 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:41595035-41595232 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089709;SRR2089714;SRR2089707;SRR2089708 |
Length | 25 |
Mature sequence(if miRNA) | 1 - AAGUUUCGAACUUGUCUUGUCUGUC - 25 |
Stem-loop(if miRNA) |
--                       A    A      A      G            U A      A          C   AAUAAC ACUAUCCUAUCUA   CAGACAAGACAAGUUCGAAGCUU GAUG UGUCUA CGAUUG AAAAAUAAUGAU G AGAGAU AGGAAGACCA AAA      G             U   ||||||||||||||||||||||| |||| |||||| |||||| |||||||||||| | |||||| |||||||||| |||      |             U   GUCUGUUCUGUUCAAGCUUUGAA CUAC ACAGAU GCUAAC UUUUUAUUACUA C UCUCUA UCCUUCUGGU UUU      G             A CU                       C    C      C      -            U C      C          A   ----AA UGGAUGCUAACAA |
Stem-loop sequence | CAGACAAGACAAGUUCGAAGCUUAGAUGAUGUCUAACGAUUGGAAAAAUAAUGAUUGAAGAGAUAAGGAAGACCACAAAAAUAACGACUAUCCUAUCUAUUAAACAAUCGUAGGUGAAUUUAUGGUCUUCCUCAUCUCUCCUAUCAUUAUUUUUCAAUCGCUAGACACCAUCCAAGUUUCGAACUUGUCUUGUCUGUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008655993.2 |
|
1.5 | PREDICTED: Zea mays beta-glucuronosyltransferase GlcAT14A (LOC103634466), transcript variant X1, mRNA | NA | coding protein | psRNATarget |