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BaseInfo

ncRNA ID novel_zma_miR745
Species Zea mays
Class miRNA
Genome position Chr1:53214005-53214177 [-]
Reference genome RefGen_v4
Source SRR2089709;SRR2089710;SRR1997865;SRR5451003;SRR2089703
Length 24
Mature sequence(if miRNA) 150 - GGAUUUAGGACGGGUGCACUCCGC - 173
Stem-loop(if miRNA) --         A                  C            C          UUUGG       ---G  AGG    U   CUU     U
  GGAUUUAGG CGGGUGCACUCCGCCACC GGUCGGAGAUUU CUCUCCGACA     UGCGCCA    GU   GGGC AGG   UAGGU U
  ||||||||| |||||||||||||||||| |||||||||||| ||||||||||     |||||||    ||   |||| |||   |||||
  CCUAAAUCC GCCCACGUGAGGCGGUGG UCGGCCUCUAAA GAGAGGCUGU     ACGUGGU    CG   CUCG UCC   GUUCG U
GU         C                  -            U          -----       AGUA  --A    C   UUU     U
Stem-loop sequence GGAUUUAGGACGGGUGCACUCCGCCACCCGGUCGGAGAUUUCCUCUCCGACAUUUGGUGCGCCAGGUAGGGGGCUAGGCUUUAGGUUUUUGCUUGUUUCCUCGCUCAGCAUGAUGGUGCAUGUCGGAGAGUAAAUCUCCGGCUGGUGGCGGAGUGCACCCGCCCUAAAUCCUG