ncRNA ID | novel_zma_miR745 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:53214005-53214177 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089709;SRR2089710;SRR1997865;SRR5451003;SRR2089703 |
Length | 24 |
Mature sequence(if miRNA) | 150 - GGAUUUAGGACGGGUGCACUCCGC - 173 |
Stem-loop(if miRNA) |
--         A                  C            C          UUUGG       ---G  AGG    U   CUU     U   GGAUUUAGG CGGGUGCACUCCGCCACC GGUCGGAGAUUU CUCUCCGACA     UGCGCCA    GU   GGGC AGG   UAGGU U   ||||||||| |||||||||||||||||| |||||||||||| ||||||||||     |||||||    ||   |||| |||   |||||   CCUAAAUCC GCCCACGUGAGGCGGUGG UCGGCCUCUAAA GAGAGGCUGU     ACGUGGU    CG   CUCG UCC   GUUCG U GU         C                  -            U          -----       AGUA  --A    C   UUU     U |
Stem-loop sequence | GGAUUUAGGACGGGUGCACUCCGCCACCCGGUCGGAGAUUUCCUCUCCGACAUUUGGUGCGCCAGGUAGGGGGCUAGGCUUUAGGUUUUUGCUUGUUUCCUCGCUCAGCAUGAUGGUGCAUGUCGGAGAGUAAAUCUCCGGCUGGUGGCGGAGUGCACCCGCCCUAAAUCCUG |