Search result

BaseInfo

ncRNA ID novel_zma_miR743
Species Zea mays
Class miRNA
Genome position Chr5:221706019-221706098 [-]
Reference genome RefGen_v4
Source SRR1583943;SRR1583941
Length 24
Mature sequence(if miRNA) 57 - UAAGCUGGUGUGUUUGGAACCACC - 80
Stem-loop(if miRNA) --    CU   G         C  C U       -CAU   C
  UAAG  GGU UGUUUGGAA CA C CAGUUUU    AAA C
  ||||  ||| ||||||||| || | |||||||    |||
  AUUC  CCG ACAAACCUU GU G GUCAAAA    UUU A
AC    --   G         C  A -       AUUU   G
Stem-loop sequence UAAGCUGGUGUGUUUGGAACCACCUCAGUUUUCAUAAACCAGUUUUUUAAAAACUGGAUGCUUCCAAACAGGCCCUUACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008664904.2
ncRNA:24   CCACCAAGGUUUGUGUGGUCGAAU   1
  ***|*|||||||||||*||||||=
targets:61   UCAGCUUCCAAACACAGCAGCUUG   84

2.5 PREDICTED: Zea mays uncharacterized LOC103641558 (LOC103641558), mRNA NA coding protein psRNATarget