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BaseInfo

ncRNA ID	novel_zma_miR742
Species	Zea mays
Class	miRNA
Genome position	Chr1:56983549-56983705 [-]
Reference genome	RefGen_v4
Source	SRR2089709;SRR2089711;SRR2089713;SRR5451004
Length	24
Mature sequence(if miRNA)	134 - ACCAAUUUAGGGCUUGUUCGGUUA - 157
Stem-loop(if miRNA)	--A  AA  U                -   C    A  CA       GA          AAAAAUUGUGAAGA   UUGAGCUGUU    CC  UU AGGGCUUGUUCGGUUA UUC CAAU CA  UGGAUUG  UGGGAUUGGA              AGU          U    ||  || |||||||||||||||| ||| |||| ||  |||||||  ||||||||||              |||    GG  GA UCCCGAACAAGCCAAU GAG GUUA GU  ACCUAAC  GCCCUAACCU              ACC          G AGG  GG  U                C   A    G  AC       UC          --------------   CAAACUUAGG
Stem-loop sequence	ACCAAUUUAGGGCUUGUUCGGUUAUUCCCAAUACACAUGGAUUGGAUGGGAUUGGAAAAAAUUGUGAAGAAGUUUGAGCUGUUUGGGAUUCAAACCCAUCCAAUCCCGCUCAAUCCACAUGGAUUGAGAGCUAACCGAACAAGCCCUUAGGGGGGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU956568.1	ncRNA:24   AUUGGCUUGUUCGGGAUUUAACCA   1   ||||||||||||||||=||||||* targets:1661   UAACCGAACAAGCCCUGAAUUGGC   1684 Target Full Sequence	2.5	Zea mays clone 1566799 mRNA sequence	NA	coding protein	psRNATarget
XM_008645912.2	ncRNA:24   AUUGGCUUGUUCGGGAUUUAACCA   1   |||||||||||||||||||*|||| targets:1654   UAACCGAACAAGCCCUAAACUGGU   1677 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC100383981 (LOC100383981), transcript variant X1, mRNA	NA	coding protein	psRNATarget
NM_001176594.1	ncRNA:24   AUUGGCUUGUUCGGGAUUUAACCA   1   |||||||||||||||||||*|||| targets:1163   UAACCGAACAAGCCCUAAACUGGU   1186 Target Full Sequence	1.5	Zea mays uncharacterized LOC100383981 (LOC100383981), mRNA	NA	coding protein	psRNATarget
BT068797.1	ncRNA:24   AUUGGCUUGUUCGGGAUUUAACCA   1   |||||||||||||||||||*|||| targets:1163   UAACCGAACAAGCCCUAAACUGGU   1186 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0382L20 mRNA, complete cds	NA	coding protein	psRNATarget