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BaseInfo

ncRNA ID	novel_zma_miR732
Species	Zea mays
Class	miRNA
Genome position	Chr5:222165945-222166134 [+]
Reference genome	RefGen_v4
Source	SRR1583943;SRR1583941;SRR1583944;SRR2647221;SRR2647343;SRR2647385;SRR2647386;SRR2647390;SRR2647391;SRR1583942
Length	22
Mature sequence(if miRNA)	169 - UGCUGGUCCUCUCUAAGGUUCC - 190
Stem-loop(if miRNA)	--    ACG    U        U   --    UU  AUAAUCUCCUUAUAU    AUCCAUACCAAGUCUAUCGCAAUCCGAGUACAGAUGCAUCCUGGGCAU   AAUC   GGGG GGACUAGU AGG  UUGG  AG               UUCC                                                C   ||||   |||| |||||||| |||  ||||  ||               ||||                                                C   UUGG   UCUC CCUGGUCG UCC  AACC  UU               CGAC                                                A CC    -AA    U        U   CG    CU  --------------C    UGAGUCGACGUUAAGGUAGAACCCAAGCUCCUGGUCAGACGUGAUUUU
Stem-loop sequence	AAUCACGGGGGUGGACUAGUUAGGUUGGUUAGAUAAUCUCCUUAUAUUUCCAUCCAUACCAAGUCUAUCGCAAUCCGAGUACAGAUGCAUCCUGGGCAUCCAUUUUAGUGCAGACUGGUCCUCGAACCCAAGAUGGAAUUGCAGCUGAGUCAGCCUUUCCCAAGCCCUUGCUGGUCCUCUCUAAGGUUCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT088142.1	ncRNA:22   CCUUGGAAUCUCUCCUGGUCGU   1   ||||||||=||||||||||||| targets:896   GGAACCUUGGAGAGGACCAGCA   917 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFc0033O24 mRNA, complete cds	NA	coding protein	psRNATarget
BT086630.1	ncRNA:22   CCUUGGAAUCUCUCCUGGUCGU   1   ||*|||||=||||||||||||| targets:173   GGUACCUUGGAGAGGACCAGCA   194 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFa0066I05 mRNA, complete cds	NA	coding protein	psRNATarget
BT036284.1	ncRNA:22   CCUUGGAAUCUCUCCUGGUCGU   1   ||*|||||=||||||||||||| targets:321   GGUACCUUGGAGAGGACCAGCA   342 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0104O09 mRNA, complete cds	NA	coding protein	psRNATarget
EU972514.1	ncRNA:22   CCUUGGAAUCUCUCCUGGUCGU   1   ||*|||||=||||||||||||| targets:577   GGUACCUUGGAGAGGACCAGCA   598 Target Full Sequence	1.0	Zea mays clone 382551 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EZ103264.1	ncRNA:22   CCUUGGAAUCUCUCCUGGUCGU   1   ||*|||||=|||||*||||||| targets:28   GGUACCUUGGAGAGAACCAGCA   49 Target Full Sequence	2.5	TSA: Zea mays contig38921, mRNA sequence	NA	coding protein	psRNATarget