| ncRNA ID | osa-miR5499 |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr4:17241717-17241841 [+] |
| Reference genome | MSU7 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 95 - GAAGGAAGAAUCGUUAUGGAA - 115 |
| Stem-loop(if miRNA) |
U --U UU A G -A CG -ACCUU U UCUGC GUUCCAUG CGAUUCUUC UUUGG GAUCUA CAUCAG GGA AAG C ||||| |||||||| ||||||||| ||||| |||||| |||||| ||| ||| AGACG UAAGGUAU GCUAAGAAG AAGCC UUAGAU GUAGUU CCU UUC U U UAG -U G G AG UA AUACAC U |
| Stem-loop sequence | UUCUGCUGUUCCAUGUUCGAUUCUUCAUUUGGGGAUCUAACAUCAGCGGGAACCUUAAGUCUUCUUCACAUAUCCAUUUGAUGGAUAGAUUGCCGAAGGAAGAAUCGUUAUGGAAUGAUGCAGAU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AK121795.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:J033095K05, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| XM_015792925.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4345759 (LOC4345759), mRNA | uncharacterized LOC4345759(LOC4345759) | coding protein | psRNATarget |
| 1 | PMID:21679406
"Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa"; Wei LQ, Yan LF, Wang T; Genome Biol. 12:R53(2011). |