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BaseInfo

ncRNA ID	ath-miR8166
Species	Arabidopsis thaliana
Class	miRNA
Genome position	chr1:4525271-4525360 [-]
Reference genome	TAIR10
Source	miRBase
Length	22
Mature sequence(if miRNA)	46 - AGAGAGUGUAGAAAGUUUCUCA - 67
Stem-loop(if miRNA)	AAUAAAAAU         --GAAG  GA AG          U    A          AAUGAAAAU      GA  G  UGUAGAAAGU UCUC C          |||||||||      ||  |  |||||||||| ||||          UUACUUUUA      CU  C  ACAUUUUUCA AGAG U ----UUAUU         ACAGUA  AC CA          U    U
Stem-loop sequence	AAUAAAAAUAAUGAAAAUGAAGGAGAGAGUGUAGAAAGUUUCUCACUUGAGAUACUUUUUACAACCCAUCAUGACAAUUUUCAUUUUAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_126297.5	ncRNA:22   ACUCUUUGAAAGAUGUGAGAGA   1   |||||||||||||||||||||| targets:1388   UGAGAAACUUUCUACACUCUCU   1409 Target Full Sequence	0.0	Arabidopsis thaliana NAD(P)-binding Rossmann-fold superfamily protein mRNA	NAD(P)-binding Rossmann-fold superfamily protein(AT2G02400)	coding protein	psRNATarget
NM_101498.4	ncRNA:22   ACUCUUUGAAAGAUGUGAGAGA   1   *|||||*||*|||||||||||| targets:259   AGAGAAUCUAUCUACACUCUCU   280 Target Full Sequence	2.5	Arabidopsis thaliana plant/protein (DUF2358) mRNA	plant/protein (DUF2358)(AT1G16320)	coding protein	psRNATarget
BX817915.1	ncRNA:22   ACUCUUUGAAAGAUGUGAGAGA   1   *|||||*||*|||||||||||| targets:223   AGAGAAUCUAUCUACACUCUCU   244 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL4ZD09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
AF462832.1	ncRNA:22   ACUCUUUGAAAGAUGUGAGAGA   1   *|||||*||*|||||||||||| targets:225   AGAGAAUCUAUCUACACUCUCU   246 Target Full Sequence	2.5	Arabidopsis thaliana At1g16320/F3O9_12 mRNA, complete cds	NA	coding protein	psRNATarget
AY142029.1	ncRNA:22   ACUCUUUGAAAGAUGUGAGAGA   1   *|||||*||*|||||||||||| targets:129   AGAGAAUCUAUCUACACUCUCU   150 Target Full Sequence	2.5	Arabidopsis thaliana At1g16320/F3O9_12 mRNA, complete cds	NA	coding protein	psRNATarget

Reference

1	PMID:24119003 "Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots"; Vidal EA, Moyano TC, Krouk G, Katari MS, Tanurdzic M, McCombie WR, Coruzzi GM, Gutierrez RA; BMC Genomics. 14:701(2013).