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BaseInfo

ncRNA ID	novel_zma_miR722
Species	Zea mays
Class	miRNA
Genome position	Chr10:134091556-134091606 [-]
Reference genome	RefGen_v4
Source	SRR2089709;SRR2089706
Length	24
Mature sequence(if miRNA)	1 - AAGCUGGCUGUGGGGAAAAGCUGA - 24
Stem-loop(if miRNA)	--       UU   --A        U   GGCUUUU  CUG   CCAGCUUU C   |||||||  |||   |||||||| U   UCGAAAA  GGU   GGUCGAAA G AG       GG   GUC        A
Stem-loop sequence	GGCUUUUUUCUGACCAGCUUUUCUGAAAAGCUGGCUGUGGGGAAAAGCUGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020545921.1	ncRNA:24   AGUCGAAAAGGGGUGUCGGUCGAA   1   |||||||||||||||||||||||| targets:2218   UCAGCUUUUCCCCACAGCCAGCUU   2241 Target Full Sequence	0.0	PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC109943094), mRNA	NA	coding protein	psRNATarget
BT019048.1	ncRNA:24   AGUCGAAAAGGGGUGUCGGUCGAA   1   *||||||||||||||||||||||| targets:124   CCAGCUUUUCCCCACAGCCAGCUU   147 Target Full Sequence	0.0	Zea mays clone Contig569.F mRNA sequence	NA	coding protein	psRNATarget
XM_008667434.2	ncRNA:24   AGUCGAAAAGGGGUGUCGGUCGAA   1   *||||||||||||||||||||||| targets:2397   CCAGCUUUUCCCCACAGCCAGCUU   2420 Target Full Sequence	0.0	PREDICTED: Zea mays putative nuclease HARBI1 (LOC103644234), mRNA	NA	coding protein	psRNATarget
EZ078358.1	ncRNA:24   AGUCGAAAAGGGGUGUCGGUCGAA   1   |||*|||*||=||||||||||||| targets:101   UCAACUUAUCUCCACAGCCAGCUU   124 Target Full Sequence	2.0	TSA: Zea mays contig13997, mRNA sequence	NA	coding protein	psRNATarget
XM_008658633.1	ncRNA:20   GAAAAG-GGGUGUCGGUCGAA   1   ||||||-|||||||||||||| targets:1   CUUUUCUCCCACAGCCAGCUU   21 Target Full Sequence	2.0	PREDICTED: Zea mays protein CLT1, chloroplastic (LOC103636274), mRNA	NA	coding protein	psRNATarget
EU963449.1	ncRNA:24   AGUCGAAAAGGGGUGUCGGUCGAA   1   *|||*||*|||||||||||||*|| targets:721   CCAGAUUCUCCCCACAGCCAGAUU   744 Target Full Sequence	2.5	Zea mays clone 262668 mRNA sequence	NA	coding protein	psRNATarget
XM_008677133.2	ncRNA:24   AGUCGAAAAGGGGUGUCGGUCGAA   1   *|||*||*|||||||||||||*|| targets:2298   CCAGAUUCUCCCCACAGCCAGAUU   2321 Target Full Sequence	2.5	PREDICTED: Zea mays phosphoglucomutase, chloroplastic (LOC103651489), mRNA	NA	coding protein	psRNATarget