ncRNA ID | novel_zma_miR719 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:132404566-132404688 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089709;SRR2089710;SRR2089701;SRR2089708 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGGGACUGCACUGCGUACAUCUGU - 24 |
Stem-loop(if miRNA) |
--         -    AUCA       G      -    C     UGCUC    U   -----   U   GGGUGUGCG GGUG    AGUUUUU UGAGCG UACU GCGAC     GCUU GUC     UGG C   ||||||||| ||||    ||||||| |||||| |||| |||||     |||| |||     |||   UCUACAUGC UCAC    UCAGGGA GCUUGC GUGG UGCUG     CGAA UAG     ACC G UG         G    ---G       -      C    C     CUCCU    C   UCGCA   A |
Stem-loop sequence | GGGUGUGCGGGUGAUCAAGUUUUUGUGAGCGUACUCGCGACUGCUCGCUUUGUCUGGUCGACCAACGCUGAUCAAGCUCCUCGUCGUCGGUGCCGUUCGAGGGACUGCACUGCGUACAUCUGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ109992.1 |
|
2.5 | TSA: Zea mays contig45652, mRNA sequence | NA | coding protein | psRNATarget |