Search result

BaseInfo

ncRNA ID	novel_zma_miR716
Species	Zea mays
Class	miRNA
Genome position	Chr1:155341883-155341955 [-]
Reference genome	RefGen_v4
Source	SRR2089709
Length	23
Mature sequence(if miRNA)	1 - AAUAACCUUAUUUUCGGCGGCUU - 23
Stem-loop(if miRNA)	-GA               G             UG G    CCGCCGAAAAUAAGG UAUUUUCGGCGGC  U U    ||||||||||||||| |||||||||||||  |    GGCGGCUUUUAUUCC AUAAAAGCCGCCG  G C UUC               A             GU A
Stem-loop sequence	GACCGCCGAAAAUAAGGGUAUUUUCGGCGGCUGUGUCAGUGGCCGCCGAAAAUAACCUUAUUUUCGGCGGCUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020546193.1	ncRNA:23   UUCGGCGGCUUUUAUUCCAAUAA   1   *=||||||||||||||||||||| targets:521   UGGCCGCCGAAAAUAAGGUUAUU   543 Target Full Sequence	0.0	PREDICTED: Zea mays spidroin-1-like (LOC103636899), mRNA	NA	coding protein	psRNATarget
BT065567.1	ncRNA:23   UUCGGCGGCUUUUAUUCCAAUAA   1   *|||||||||||||||||*|||| targets:1032   CAGCCGCCGAAAAUAAGGCUAUU   1054 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0298D06 mRNA, complete cds	NA	coding protein	psRNATarget
BT065567.1	ncRNA:23   UUCGGCGGCUUUUAUUCCAAUAA   1   *|||||||||||||||||*|||| targets:1073   CAGCCGCCGAAAAUAAGGCUAUU   1095 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0298D06 mRNA, complete cds	NA	coding protein	psRNATarget