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BaseInfo

ncRNA ID osa-miR5543
Species Oryza sativa
Class miRNA
Genome position Chr4:16417248-16417349 [-]
Reference genome MSU7
Source miRBase
Length 21
Mature sequence(if miRNA) 72 - UAUGAAUGGUAUAUUUUCUUG - 92
Stem-loop(if miRNA) -                 G             C          AUUAAUA
 AUUGAAAUCAUAUGAAU GUAUAUUUUCUUG AACAUGUGUA       C
 ||||||||||||||||| ||||||||||||| ||||||||||       C
 UGACUUUAGUAUAUUUG CAUAUAAAAGAAC UUGUACACAU       A
U                 G             A          CCACGAA
Stem-loop sequence AUUGAAAUCAUAUGAAUGGUAUAUUUUCUUGCAACAUGUGUAAUUAAUACCAAAGCACCUACACAUGUUACAAGAAAAUAUACGGUUUAUAUGAUUUCAGUU

Reference

1 PMID:21679406
"Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa";
Wei LQ, Yan LF, Wang T;
Genome Biol. 12:R53(2011).