ncRNA ID | novel_zma_miR709 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:202267741-202267855 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089709;SRR5451003;SRR5451004;SRR5451005;SRR2089706;SRR2089707;SRR2089708 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CGAAAUCGGUAUCGGAAUCGGCGU - 24 |
Stem-loop(if miRNA) |
-G  --     A  A           --AAUUUUUCA    GAU  AUUGAUAACGGUAUU   GU  AUUCC GA AUCGAUUUCGA           ACCG   UC               U   ||  ||||| || |||||||||||           ||||   ||   CG  UAAGG CU UGGCUAAAGCU           CUUU   UG               U UG  GC     -  A           AUCUUUUAAAA    ---  GCUAAGGCAAAAGCU |
Stem-loop sequence | GGUAUUCCAGAAAUCGAUUUCGAAAUUUUUCAACCGGAUUCAUUGAUAACGGUAUUUUUCGAAAACGGAAUCGGUUUUCAAAAUUUUCUAUCGAAAUCGGUAUCGGAAUCGGCGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU940733.1 |
|
2.5 | Zea mays clone 1061280 mRNA sequence | NA | coding protein | psRNATarget |