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BaseInfo

ncRNA ID	novel_zma_miR707
Species	Zea mays
Class	miRNA
Genome position	Chr1:208930145-208930213 [-]
Reference genome	RefGen_v4
Source	SRR2089709;SRR2089710
Length	24
Mature sequence(if miRNA)	46 - UGCCCUCUGCACAGGGACGGACGG - 69
Stem-loop(if miRNA)	--    C  U    A   --      G     C  GC   UGCC UC GCAC GGG  ACGGAC GUCCG GC  A   |||| || |||| |||  |||||| ||||| ||   ACGG AG CGUG UCC  UGCCUG CAGGC CG  G GC    -  -    G   GG      G     -  GG
Stem-loop sequence	UGCCCUCUGCACAGGGACGGACGGUCCGCGCGCAGGGGCCGGACGGUCCGUGGCCUGGUGCGAGGCACG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ067064.1	ncRNA:24   GGCAGGCAGGGACACGUCUCCCGU   1   |||||||*|||||||||||||||| targets:37   CCGUCCGCCCCUGUGCAGAGGGCA   60 Target Full Sequence	1.0	TSA: Zea mays contig02698, mRNA sequence	NA	coding protein	psRNATarget
NM_001196968.1	ncRNA:24   GGCAGGCAGGGACACGUCUCCCGU   1   |||||||*|||||||||||||||| targets:1349   CCGUCCGCCCCUGUGCAGAGGGCA   1372 Target Full Sequence	1.0	Zea mays uncharacterized LOC100502490 (LOC100502490), mRNA	NA	coding protein	psRNATarget
BT088349.1	ncRNA:24   GGCAGGCAGGGACACGUCUCCCGU   1   |||||||*|||||||||||||||| targets:1349   CCGUCCGCCCCUGUGCAGAGGGCA   1372 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFc0151F11 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020539115.1	ncRNA:24   GGCAGGCAGGGACACGUCUCCCGU   1   |||||||*||||||*||||||||| targets:2792   CCGUCCGCCCCUGUUCAGAGGGCA   2815 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100384241 (gpm299b), transcript variant X7, mRNA	NA	coding protein	psRNATarget
NM_001149448.1	ncRNA:24   GGCAGGCAGGGACACGUCUCCCGU   1   =|*|==||=||||||||||||||* targets:788   UCAUUUGUUCCUGUGCAGAGGGCC   811 Target Full Sequence	3.0	Zea mays uncharacterized LOC100275353 (LOC100275353), mRNA	NA	coding protein	psRNATarget
EU955431.1	ncRNA:24   GGCAGGCAGGGACACGUCUCCCGU   1   =|*|==||=||||||||||||||* targets:788   UCAUUUGUUCCUGUGCAGAGGGCC   811 Target Full Sequence	3.0	Zea mays clone 1531862 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
BT039774.1	ncRNA:24   GGCA----GGCAGGGACACGUCUCCCGU   1   =|||----|*|*=||||||||||||||| targets:491   UCGUGGUGCAGCUCCUGUGCAGAGGGCA   518 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFc0043M03 mRNA, complete cds	NA	coding protein	psRNATarget
BT017739.1	ncRNA:24   GGCA----GGCAGGGACACGUCUCCCGU   1   =|||----|*|*=||||||||||||||| targets:502   UCGUGGUGCAGCUCCUGUGCAGAGGGCA   529 Target Full Sequence	3.0	Zea mays clone EL01N0449B09.c mRNA sequence	NA	coding protein	psRNATarget
NM_001155639.2	ncRNA:24   GGCA----GGCAGGGACACGUCUCCCGU   1   =|||----|*|*=||||||||||||||| targets:512   UCGUGGUGCAGCUCCUGUGCAGAGGGCA   539 Target Full Sequence	3.0	Zea mays Methionyl-tRNA formyltransferase (pco129446), mRNA	NA	coding protein	psRNATarget
EU962122.1	ncRNA:24   GGCA----GGCAGGGACACGUCUCCCGU   1   =|||----|*|*=||||||||||||||| targets:507   UCGUGGUGCAGCUCCUGUGCAGAGGGCA   534 Target Full Sequence	3.0	Zea mays clone 240364 methionyl-tRNA formyltransferase mRNA, complete cds	NA	coding protein	psRNATarget