ncRNA ID | osa-miR5511 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr4:14653011-14653138 [-] |
Reference genome | MSU7 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 11 - CAUAUCCCAGCUGUUUCGGCC - 31 |
Stem-loop(if miRNA) |
UUG UG AAG      -  GU U         -------------U    AUAACUUCCUAGCUGGCUGGC    G  G   AAGGCC AA  G UUGGGAUGU              GGAA                     C    |  |   |||||| ||  | |||||||||              ||||    C  C   UUCCGG UU  U GACCCUAUA              CCGA                     U UUA GU --G      C  UG C         CGUACCAAACUUUG    GAAACAGAUACUUUUAAAGAA |
Stem-loop sequence | UUGGUGGAAGAAGGCCAAGUGUUUGGGAUGUUGGAAAUAACUUCCUAGCUGGCUGGCCUAAGAAAUUUUCAUAGACAAAGAGCCGUUUCAAACCAUGCAUAUCCCAGCUGUUUCGGCCUUGCUGCAUU |
1 | PMID:21679406
"Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa"; Wei LQ, Yan LF, Wang T; Genome Biol. 12:R53(2011). |