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BaseInfo

ncRNA ID novel_zma_miR689
Species Zea mays
Class miRNA
Genome position Chr1:262325515-262325563 [-]
Reference genome RefGen_v4
Source SRR2089709;SRR2089712;SRR2287159;SRR2287163;SRR2089698;SRR2089699;SRR2089700;SRR2089702;SRR2089704;SRR2089706;SRR2089708
Length 24
Mature sequence(if miRNA) 1 - UGCAAUUUAUCGGGCACUCGGCAA - 24
Stem-loop(if miRNA) --                U    C
  GUCGAGUGCCCGAUGG UUGC G
  |||||||||||||||| |||| A
  CGGCUCACGGGCUAUU AACG G
AA                U    U
Stem-loop sequence GUCGAGUGCCCGAUGGUUUGCCGAGUGCAAUUUAUCGGGCACUCGGCAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008657060.2
ncRNA:24   AACGGCUCACGGGCUAUUUAACGU   1
  |||||||*||=|||||||||||||
targets:1927   UUGCCGAAUGUCCGAUAAAUUGCA   1950

2.0 PREDICTED: Zea mays uncharacterized LOC100383497 (LOC100383497), transcript variant X1, mRNA NA coding protein psRNATarget