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BaseInfo

ncRNA ID	novel_zma_miR688
Species	Zea mays
Class	miRNA
Genome position	Chr5:15743483-15743538 [+]
Reference genome	RefGen_v4
Source	SRR1583943;SRR2647385;SRR2647389;SRR2647390
Length	24
Mature sequence(if miRNA)	1 - UCUGAUCUCUCUAAUAUGAAGGGG - 24
Stem-loop(if miRNA)	--   G  C      A     A  GG GU   UCU AU UCUCUA UAUGA GG  U  A   ||| || |||||| ||||| ||  |   AGA UG AGAGAU AUAUU CC  G  C CC   G  U      -     -  UU GA
Stem-loop sequence	UCUGAUCUCUCUAAUAUGAAGGGGUGUACAGGUUCCUUAUAUAGAGAUGUGAGACC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT066231.1	ncRNA:24   GGGGAAGUAUAAUCUCUCUAGUCU   1   ||||*|||||*||*|||||||||| targets:857   CCCCCUCAUAAUACAGAGAUCAGA   880 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0110N21 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001346555.1	ncRNA:24   GGGGAAGUAUAAUCUCUCUAGUCU   1   ||||*|||||*||*|||||||||| targets:2049   CCCCCUCAUAAUACAGAGAUCAGA   2072 Target Full Sequence	2.5	Zea mays pectinesterase (LOC103637955), mRNA	NA	coding protein	psRNATarget
XM_008681307.2	ncRNA:24   GGGGAAGUAUAAUCUCUCUAGUCU   1   ||*|*|||||*||*|||||||||| targets:3650   CCACGUCAUAAUACAGAGAUCAGA   3673 Target Full Sequence	2.5	PREDICTED: Zea mays calcium-transporting ATPase 1, plasma membrane-type (LOC103654477), mRNA	NA	coding protein	psRNATarget