ncRNA ID | novel_zma_miR687 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:262833135-262833224 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089709;SRR2089711;SRR2089707 |
Length | 24 |
Mature sequence(if miRNA) | 67 - AACGGAUGGCACUCGGCAAAGAGG - 90 |
Stem-loop(if miRNA) |
--AAC                    GCU              CACA      GGAUGGCACUCGGCAAAGAG   UCUUUGCCGAGUGU    C      ||||||||||||||||||||   ||||||||||||||      UCUACUGUGAGCUGUUUCUC   AGAAACGGCUCACG    A AGAUC                    --A              AUCU |
Stem-loop sequence | AACGGAUGGCACUCGGCAAAGAGGCUUCUUUGCCGAGUGUCACACAUCUAGCACUCGGCAAAGAACUCUUUGUCGAGUGUCAUCUCUAGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT067215.1 |
|
1.5 | Zea mays full-length cDNA clone ZM_BFb0310H18 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_001175109.1 |
|
1.5 | Zea mays 1-aminocyclopropane-1-carboxylate oxidase2 (cl955_1), mRNA | NA | coding protein | psRNATarget | |||||||||
BT064046.1 |
|
1.5 | Zea mays full-length cDNA clone ZM_BFc0133L10 mRNA, complete cds | NA | coding protein | psRNATarget |