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BaseInfo

ncRNA ID	novel_zma_miR680
Species	Zea mays
Class	miRNA
Genome position	Chr1:296469538-296469671 [-]
Reference genome	RefGen_v4
Source	SRR2089709;SRR2089710;SRR2089714;SRR2089715;SRR2287031;SRR2287164;SRR2287165;SRR2089700
Length	21
Mature sequence(if miRNA)	1 - CUUGUGUCUUGGUUGUACGGU - 21
Stem-loop(if miRNA)	--CA    U       C   U      A   GU     G  --U          UUUUUUUGAAACAA     UGCA CCAAGAC CAA GAUGAA GUG  AGGAC UU   AAAAAUAUUC              C     |||| ||||||| ||| |||||| |||  ||||| ||   ||||||||||     AUGU GGUUCUG GUU CUACUU UAC  UCCUG AA   UUUUUAUAGG              C UGGC    U       U   C      A   UC     G  UAU          UAUCCUCUACCUUC
Stem-loop sequence	CAUGCAUCCAAGACCCAAUGAUGAAAGUGGUAGGACGUUUAAAAAUAUUCUUUUUUUGAAACAACCCUUCCAUCUCCUAUGGAUAUUUUUUAUAAGGUCCUCUCAUAUUCAUCCUUGUGUCUUGGUUGUACGGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY109909.1	ncRNA:21   UGGCAUGUUGGUUCUGUGUUC   1   |=*|||||||||||||=|||| targets:29   AUGGUACAACCAAGACGCAAG   49 Target Full Sequence	2.5	Zea mays CL23422_1 mRNA sequence	NA	coding protein	psRNATarget
NM_001175931.1	ncRNA:21   UGGCAUGUUGGUUCUGUGUUC   1   ||=*||||||||||||||||* targets:1392   ACUCUACAACCAAGACACAAU   1412 Target Full Sequence	3.0	Zea mays uncharacterized LOC100383271 (LOC100383271), mRNA	NA	coding protein	psRNATarget
BT066747.1	ncRNA:21   UGGCAUGUUGGUUCUGUGUUC   1   ||=*||||||||||||||||* targets:1392   ACUCUACAACCAAGACACAAU   1412 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0059C04 mRNA, complete cds	NA	coding protein	psRNATarget