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BaseInfo

ncRNA ID novel_zma_miR677
Species Zea mays
Class miRNA
Genome position Chr4:192330993-192331157 [+]
Reference genome RefGen_v4
Source SRR1583943
Length 24
Mature sequence(if miRNA) 1 - ACCGCUGCGGCCAUAGAGUGCCCC - 24
Stem-loop(if miRNA) --            A AG     C       C  C          A     A ---AAG   -A  GUCCAC  C     C     
  ACCGCUGCGGCC U  AGUGC CCCUACG GC GCAUGCAAGG GAGGG G      AGG  GC      CG UGCGG UAGUCU
  |||||||||||| |  ||||| ||||||| || |||||||||| ||||| |      |||  ||      || ||||| |||||A
  UGGCGACGCCGG A  UCACG GGGAUGU CG CGUACGUUCC CUCCC C      UCC  CG      GC ACGCC AUCAGA
CG            C CU     U       A  C          C     C AACACA   CC  ----AC  A     A     
Stem-loop sequence ACCGCUGCGGCCAUAGAGUGCCCCCUACGCGCCGCAUGCAAGGAGAGGGAGAAGAGGAGCGUCCACCGCUGCGGCUAGUCUAAGACUAACCGCAACGCAGCCCCCUACACAACCCCCUCCCCUUGCAUGCCGCAUGUAGGGUGCACUUCACGGCCGCAGCGGUGC