ncRNA ID | novel_zma_miR677 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:192330993-192331157 [+] |
Reference genome | RefGen_v4 |
Source | SRR1583943 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACCGCUGCGGCCAUAGAGUGCCCC - 24 |
Stem-loop(if miRNA) |
--            A AG     C       C  C          A     A ---AAG   -A  GUCCAC  C     C        ACCGCUGCGGCC U  AGUGC CCCUACG GC GCAUGCAAGG GAGGG G      AGG  GC      CG UGCGG UAGUCU   |||||||||||| |  ||||| ||||||| || |||||||||| ||||| |      |||  ||      || ||||| |||||A   UGGCGACGCCGG A  UCACG GGGAUGU CG CGUACGUUCC CUCCC C      UCC  CG      GC ACGCC AUCAGA CG            C CU     U       A  C          C     C AACACA   CC  ----AC  A     A      |
Stem-loop sequence | ACCGCUGCGGCCAUAGAGUGCCCCCUACGCGCCGCAUGCAAGGAGAGGGAGAAGAGGAGCGUCCACCGCUGCGGCUAGUCUAAGACUAACCGCAACGCAGCCCCCUACACAACCCCCUCCCCUUGCAUGCCGCAUGUAGGGUGCACUUCACGGCCGCAGCGGUGC |