ncRNA ID | novel_zma_miR657 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:244006874-244006957 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089709;SRR2089712;SRR2089713;SRR2089715;SRR2287160;SRR2287164;SRR1997865;SRR5451003;SRR1997866;SRR2089699;SRR2089700;SRR2089701;SRR2089702;SRR2089703;SRR2089704;SRR2089705;SRR2089706;SRR2089707;SRR2089708 |
Length | 24 |
Mature sequence(if miRNA) | 61 - ACCUGGGACACUCGGCAAAGACGC - 84 |
Stem-loop(if miRNA) |
--U             C G     CA               UA    UCUUUGCCGAGUG U UCAGG  GACACUCGGCAAAGG  A    ||||||||||||| | |||||  |||||||||||||||    AGAAACGGCUCAC A GGUCC  CUGUGAGCCGUUUCC  A CGC             - G     -A               UC |
Stem-loop sequence | UUCUUUGCCGAGUGCUGUCAGGCAGACACUCGGCAAAGGUAAACUCCUUUGCCGAGUGUCACCUGGGACACUCGGCAAAGACGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU952231.1 |
|
1.5 | Zea mays clone 1234152 mRNA sequence | NA | coding protein | psRNATarget |