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BaseInfo

ncRNA ID novel_zma_miR657
Species Zea mays
Class miRNA
Genome position Chr1:244006874-244006957 [+]
Reference genome RefGen_v4
Source SRR2089709;SRR2089712;SRR2089713;SRR2089715;SRR2287160;SRR2287164;SRR1997865;SRR5451003;SRR1997866;SRR2089699;SRR2089700;SRR2089701;SRR2089702;SRR2089703;SRR2089704;SRR2089705;SRR2089706;SRR2089707;SRR2089708
Length 24
Mature sequence(if miRNA) 61 - ACCUGGGACACUCGGCAAAGACGC - 84
Stem-loop(if miRNA) --U             C G     CA               UA
   UCUUUGCCGAGUG U UCAGG  GACACUCGGCAAAGG  A
   ||||||||||||| | |||||  |||||||||||||||
   AGAAACGGCUCAC A GGUCC  CUGUGAGCCGUUUCC  A
CGC             - G     -A               UC
Stem-loop sequence UUCUUUGCCGAGUGCUGUCAGGCAGACACUCGGCAAAGGUAAACUCCUUUGCCGAGUGUCACCUGGGACACUCGGCAAAGACGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU952231.1
ncRNA:24   CGCAGAAACGGCUCACAGGGUCCA   1
  ****|||||||||||||||*||||
targets:1444   AAUACUUUGCCGAGUGUCCAAGGU   1467

1.5 Zea mays clone 1234152 mRNA sequence NA coding protein psRNATarget