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BaseInfo

ncRNA ID novel_zma_miR636
Species Zea mays
Class miRNA
Genome position Chr9:7478889-7478980 [-]
Reference genome RefGen_v4
Source SRR2089709;SRR2089713;SRR2089714;SRR2287160;SRR2287161;SRR2287163;SRR1997865;SRR5105961;SRR5451006;SRR1997866;SRR2089703
Length 24
Mature sequence(if miRNA) 69 - UCGGAAUUUUAGAUCGGAAUCGGU - 92
Stem-loop(if miRNA) --    --      A    G   U     -     AUCGCUAA   CU
  UCGG  AAUUUU GAUC GAA CGGUA UCGAA        GUC  U
  ||||  |||||| |||| ||| ||||| |||||        |||  U
  AGCC  UUAAGA CUGG UUU GCCAU GGCUU        CAG  A
UA    AU      -    G   U     U     -CUUUUGC   CC
Stem-loop sequence UCGGAAUUUUAGAUCGGAAUCGGUAUCGAAAUCGCUAAGUCCUUUACCGACCGUUUUCUUCGGUUACCGUUUUGGGUCAGAAUUUACCGAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU940733.1
ncRNA:24   UGGCUAAGGCUAGAUUUUAAGGCU   1
  ||||||||||=|*|||||||||||
targets:181   ACCGAUUCCGGUAUAAAAUUCCGA   204

2.5 Zea mays clone 1061280 mRNA sequence NA coding protein psRNATarget