ncRNA ID | novel_zma_miR636 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr9:7478889-7478980 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089709;SRR2089713;SRR2089714;SRR2287160;SRR2287161;SRR2287163;SRR1997865;SRR5105961;SRR5451006;SRR1997866;SRR2089703 |
Length | 24 |
Mature sequence(if miRNA) | 69 - UCGGAAUUUUAGAUCGGAAUCGGU - 92 |
Stem-loop(if miRNA) |
--    --      A    G   U     -     AUCGCUAA   CU   UCGG  AAUUUU GAUC GAA CGGUA UCGAA        GUC  U   ||||  |||||| |||| ||| ||||| |||||        |||  U   AGCC  UUAAGA CUGG UUU GCCAU GGCUU        CAG  A UA    AU      -    G   U     U     -CUUUUGC   CC |
Stem-loop sequence | UCGGAAUUUUAGAUCGGAAUCGGUAUCGAAAUCGCUAAGUCCUUUACCGACCGUUUUCUUCGGUUACCGUUUUGGGUCAGAAUUUACCGAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU940733.1 |
|
2.5 | Zea mays clone 1061280 mRNA sequence | NA | coding protein | psRNATarget |