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BaseInfo

ncRNA ID novel_zma_miR619
Species Zea mays
Class miRNA
Genome position Chr1:211148218-211148274 [+]
Reference genome RefGen_v4
Source SRR2089709;SRR2089710;SRR2089714;SRR5451003;SRR2089702;SRR2089705;SRR2089706;SRR2089707;SRR2089708
Length 24
Mature sequence(if miRNA) 1 - UGCAACGAGGACAUAUAAUAUCAC - 24
Stem-loop(if miRNA) --       AG           U  CG U
  UGCAACG  GACAUAUAAUA CA  G A
  |||||||  ||||||||||| ||  |
  ACGUUGU  CUGUAUAUUAU GU  U A
CA       CU           -  AU C
Stem-loop sequence UGCAACGAGGACAUAUAAUAUCACGGUAACUUAUGUAUUAUAUGUCUCUGUUGCAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI407251.1
ncRNA:24   CACUAUAAUAUACAGGAGCAACGU   1
  ||||||||||||||||*|||||||
targets:52   GUGAUAUUAUAUGUCCCCGUUGCA   75

1.5 Sequence 5376 from Patent EP2074227 NA coding protein psRNATarget
JB167712.1
ncRNA:24   CACUAUAAUAUACAGGAGCAACGU   1
  ||||||||||||||||*|||||||
targets:52   GUGAUAUUAUAUGUCCCCGUUGCA   75

1.5 Sequence 5376 from Patent EP2559767 NA coding protein psRNATarget
LQ239381.1
ncRNA:24   CACUAUAAUAUACAGGAGCAACGU   1
  ||||||||||||||||*|||||||
targets:52   GUGAUAUUAUAUGUCCCCGUUGCA   75

1.5 Sequence 5376 from Patent EP2985353 NA coding protein psRNATarget
XM_020546475.1
ncRNA:24   CACUAUAAUAUACAGGAGCAACGU   1
  ||||||||||||||||*|||||||
targets:1284   GUGAUAUUAUAUGUCCCCGUUGCA   1307

1.5 PREDICTED: Zea mays uncharacterized LOC109943445 (LOC109943445), mRNA NA coding protein psRNATarget