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BaseInfo

ncRNA ID	osa-miR1861e
Species	Oryza sativa
Class	miRNA
Genome position	Chr4:6536556-6536647 [+]
Reference genome	MSU7
Source	miRBase
Length	22
Mature sequence(if miRNA)	16 - CGGUCUUGUGGCAAGAACUGAG - 37
Stem-loop(if miRNA)	U     C                    A     UC U GCAUAUUC UAGGC CGGUCUUGUGGCAAGAACUG GUAGU  G U |||||||| ||||| |||||||||||||||||||| |||||  | CGUAUAAG GUCUG GCCAGAACACUGUUCUUGGC CAUCG  C A         U     A                    G     CU A
Stem-loop sequence	GCAUAUUCUUAGGCCCGGUCUUGUGGCAAGAACUGAGUAGUUCGUUAACUCGCUACGCGGUUCUUGUCACAAGACCGAGUCUGUGAAUAUGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI404181.1	ncRNA:22   GAGUCAAGAACGGUGUUCUGGC   1   |*|=|||||||=|||||||||| targets:48   CGCGGUUCUUGUCACAAGACCG   69 Target Full Sequence	2.5	Sequence 2306 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236166.1	ncRNA:22   GAGUCAAGAACGGUGUUCUGGC   1   |*|=|||||||=|||||||||| targets:48   CGCGGUUCUUGUCACAAGACCG   69 Target Full Sequence	2.5	Sequence 2161 from Patent EP2985353	NA	coding protein	psRNATarget
HI403891.1	ncRNA:22   GAGUCAAGAACGGUGUUCUGGC   1   |*|=|||||||=|||||||||| targets:48   CGCGGUUCUUGUCACAAGACCG   69 Target Full Sequence	2.5	Sequence 2016 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236311.1	ncRNA:22   GAGUCAAGAACGGUGUUCUGGC   1   |*|=|||||||=|||||||||| targets:48   CGCGGUUCUUGUCACAAGACCG   69 Target Full Sequence	2.5	Sequence 2306 from Patent EP2985353	NA	coding protein	psRNATarget
HI404304.1	ncRNA:22   GAGUCAAGAACGGUGUUCUGGC   1   |*|=|||||||=|||||||||| targets:48   CCCGGUUCUUGUCACAAGACCG   69 Target Full Sequence	2.5	Sequence 2429 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236021.1	ncRNA:22   GAGUCAAGAACGGUGUUCUGGC   1   |*|=|||||||=|||||||||| targets:48   CGCGGUUCUUGUCACAAGACCG   69 Target Full Sequence	2.5	Sequence 2016 from Patent EP2985353	NA	coding protein	psRNATarget
JB164497.1	ncRNA:22   GAGUCAAGAACGGUGUUCUGGC   1   |*|=|||||||=|||||||||| targets:48   CGCGGUUCUUGUCACAAGACCG   69 Target Full Sequence	2.5	Sequence 2161 from Patent EP2559767	NA	coding protein	psRNATarget
JB164642.1	ncRNA:22   GAGUCAAGAACGGUGUUCUGGC   1   |*|=|||||||=|||||||||| targets:48   CGCGGUUCUUGUCACAAGACCG   69 Target Full Sequence	2.5	Sequence 2306 from Patent EP2559767	NA	coding protein	psRNATarget
JB164765.1	ncRNA:22   GAGUCAAGAACGGUGUUCUGGC   1   |*|=|||||||=|||||||||| targets:48   CCCGGUUCUUGUCACAAGACCG   69 Target Full Sequence	2.5	Sequence 2429 from Patent EP2559767	NA	coding protein	psRNATarget
HI404036.1	ncRNA:22   GAGUCAAGAACGGUGUUCUGGC   1   |*|=|||||||=|||||||||| targets:48   CGCGGUUCUUGUCACAAGACCG   69 Target Full Sequence	2.5	Sequence 2161 from Patent EP2074227	NA	coding protein	psRNATarget
JB164352.1	ncRNA:22   GAGUCAAGAACGGUGUUCUGGC   1   |*|=|||||||=|||||||||| targets:48   CGCGGUUCUUGUCACAAGACCG   69 Target Full Sequence	2.5	Sequence 2016 from Patent EP2559767	NA	coding protein	psRNATarget
LQ236434.1	ncRNA:22   GAGUCAAGAACGGUGUUCUGGC   1   |*|=|||||||=|||||||||| targets:48   CCCGGUUCUUGUCACAAGACCG   69 Target Full Sequence	2.5	Sequence 2429 from Patent EP2985353	NA	coding protein	psRNATarget

Reference

1	PMID:18687877 "A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains"; Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C; Genome Res. 18:1456-1465(2008).
2	PMID:22158467 "Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage"; Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ; Plant Cell. 23:4185-4207(2011).