ncRNA ID | novel_zma_miR605 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr9:154454149-154454229 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089709;SRR2089708 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACGGGUAUGGGUUUUUUAGCGGGC - 24 |
Stem-loop(if miRNA) |
--        -U     AA     -C           -   G   CCGUUGGG  ACCCG  ACCCG  AUGGGUAUGGG UUU G   ||||||||  |||||  |||||  ||||||||||| ||| G   GGCGAUUU  UGGGU  UGGGC  UGCCCAUAUUU AAA C CG        UU     -A     AC           U   A |
Stem-loop sequence | CCGUUGGGUACCCGAAACCCGCAUGGGUAUGGGUUUGGGCAAAAUUUUAUACCCGUCACGGGUAUGGGUUUUUUAGCGGGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT042623.2 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFb0377K06 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
HI405972.1 |
|
2.5 | Sequence 4097 from Patent EP2074227 | NA | coding protein | psRNATarget | |||||||||
LQ238102.1 |
|
2.5 | Sequence 4097 from Patent EP2985353 | NA | coding protein | psRNATarget | |||||||||
JB166433.1 |
|
2.5 | Sequence 4097 from Patent EP2559767 | NA | coding protein | psRNATarget |