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BaseInfo

ncRNA ID	novel_zma_miR604
Species	Zea mays
Class	miRNA
Genome position	Chr9:156643652-156643728 [-]
Reference genome	RefGen_v4
Source	SRR2089709;SRR2089710;SRR2089712;SRR2089713;SRR2089715;SRR2287159;SRR2287161;SRR2287162;SRR2287164;SRR2287165;SRR1618883;SRR2939884;SRR3341905;SRR3385575;SRR3385651;SRR3385660;SRR4237221;SRR4237222;SRR4237223;SRR4237224;SRR4237227;SRR1997865;SRR5100255;SRR5105961;SRR5451003;SRR5451004;SRR1997866;SRR2089700;SRR2089701;SRR2089704
Length	21
Mature sequence(if miRNA)	57 - UGGAAGGGGCAUGCAGAGGAG - 77
Stem-loop(if miRNA)	--           U   G     CACG       U  G   UGGAAGGGGCA GCA AGGAG    AACGAGG GU G   ||||||||||| ||| |||||    ||||||| || U   ACCUUCUCCGU CGU UCCUC    UUGCUCC CG U UU           C   G     UCGA       C  G
Stem-loop sequence	UGGAAGGGGCAUGCAGAGGAGCACGAACGAGGUGUGGUUGGCCCCUCGUUAGCUCUCCUGUGCCUGCCUCUUCCAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI403264.1	ncRNA:21   GAGGAGACGUACGGGGAAGGU   1   ||||||||||||||||||||| targets:64   CUCCUCUGCAUGCCCCUUCCA   84 Target Full Sequence	0.0	Sequence 1389 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235111.1	ncRNA:21   GAGGAGACGUACGGGGAAGGU   1   ||||||||||||||||||||| targets:64   CUCCUCUGCAUGCCCCUUCCA   84 Target Full Sequence	0.0	Sequence 1106 from Patent EP2985353	NA	coding protein	psRNATarget
JB163725.1	ncRNA:21   GAGGAGACGUACGGGGAAGGU   1   ||||||||||||||||||||| targets:64   CUCCUCUGCAUGCCCCUUCCA   84 Target Full Sequence	0.0	Sequence 1389 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235394.1	ncRNA:21   GAGGAGACGUACGGGGAAGGU   1   ||||||||||||||||||||| targets:64   CUCCUCUGCAUGCCCCUUCCA   84 Target Full Sequence	0.0	Sequence 1389 from Patent EP2985353	NA	coding protein	psRNATarget
JB163442.1	ncRNA:21   GAGGAGACGUACGGGGAAGGU   1   ||||||||||||||||||||| targets:64   CUCCUCUGCAUGCCCCUUCCA   84 Target Full Sequence	0.0	Sequence 1106 from Patent EP2559767	NA	coding protein	psRNATarget
HI402981.1	ncRNA:21   GAGGAGACGUACGGGGAAGGU   1   ||||||||||||||||||||| targets:64   CUCCUCUGCAUGCCCCUUCCA   84 Target Full Sequence	0.0	Sequence 1106 from Patent EP2074227	NA	coding protein	psRNATarget
NM_001149519.1	ncRNA:21   GAGGAGACGUACGGGGAAGGU   1   *|||||*|||*|||||||||| targets:44   AUCCUCCGCACGCCCCUUCCA   64 Target Full Sequence	2.5	Zea mays SNARE associated Golgi protein family (LOC100275452), mRNA	NA	coding protein	psRNATarget
EU956024.1	ncRNA:21   GAGGAGACGUACGGGGAAGGU   1   *|||||*|||*|||||||||| targets:44   AUCCUCCGCACGCCCCUUCCA   64 Target Full Sequence	2.5	Zea mays clone 1555733 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget