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BaseInfo

ncRNA ID osa-miR1861d
Species Oryza sativa
Class miRNA
Genome position Chr4:6536337-6536454 [+]
Reference genome MSU7
Source miRBase
Length 22
Mature sequence(if miRNA) 18 - UGGUCUUGAGGCAGGAACUGAG - 39
Stem-loop(if miRNA) U  C      U     C        A           A  A  U       UC  UCU
 UG AUAUUC UAGGC UGGUCUUG GGCAGGAACUG GU GU GGUGAAC  GC   A
 || |||||| ||||| |||||||| ||||||||||| || || |||||||  ||
 AC UAUAAG GUCUG GCCAGAAC CUGUCCUUGGC CA CG UCACUUG  UG   U
A  A      U     A        C           G  G  C       CU  UUG
Stem-loop sequence UUGCAUAUUCUUAGGCCUGGUCUUGAGGCAGGAACUGAGUAGUUGGUGAACUCGCUCUAUGUUGUUCGUUCACUCGCGACGCGGUUCCUGUCCCAAGACCGAGUCUGUGAAUAUACAA

Reference

1 PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains";
Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C;
Genome Res. 18:1456-1465(2008).