ncRNA ID | osa-miR1861d |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr4:6536337-6536454 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 22 |
Mature sequence(if miRNA) | 18 - UGGUCUUGAGGCAGGAACUGAG - 39 |
Stem-loop(if miRNA) |
U  C      U     C        A           A  A  U       UC  UCU  UG AUAUUC UAGGC UGGUCUUG GGCAGGAACUG GU GU GGUGAAC  GC   A  || |||||| ||||| |||||||| ||||||||||| || || |||||||  ||  AC UAUAAG GUCUG GCCAGAAC CUGUCCUUGGC CA CG UCACUUG  UG   U A  A      U     A        C           G  G  C       CU  UUG |
Stem-loop sequence | UUGCAUAUUCUUAGGCCUGGUCUUGAGGCAGGAACUGAGUAGUUGGUGAACUCGCUCUAUGUUGUUCGUUCACUCGCGACGCGGUUCCUGUCCCAAGACCGAGUCUGUGAAUAUACAA |
1 | PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains"; Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C; Genome Res. 18:1456-1465(2008). |