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BaseInfo

ncRNA ID	novel_zma_miR594
Species	Zea mays
Class	miRNA
Genome position	Chr1:205576579-205576643 [+]
Reference genome	RefGen_v4
Source	SRR2089709
Length	23
Mature sequence(if miRNA)	43 - GAACUAGAACGGAAUGGCUCCAA - 65
Stem-loop(if miRNA)	--             C C      ---GCU   G   GGAGUCGUUCUGU C AGUUUU      GCU U   ||||||||||||| | ||||||      |||   CCUCGGUAAGGCA G UCAAGA      UGG U AA             A A      AAACAU   U
Stem-loop sequence	GGAGUCGUUCUGUCCCAGUUUUGCUGCUGUUUGGUUACAAAAGAACUAGAACGGAAUGGCUCCAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020546669.1	ncRNA:23   AACCUCGGUAAGGCAAGAUCAAG   1   ||||||=||||=||||||||||| targets:25   UUGGAGUCAUUUCGUUCUAGUUC   47 Target Full Sequence	2.5	PREDICTED: Zea mays hypothetical protein (LOC103643194), transcript variant X1, mRNA	NA	coding protein	psRNATarget
LQ241816.1	ncRNA:23   AACCUCGGUAAGGCAAGAUCAAG   1   |||||||||*||||||||||||* targets:105   UUGGAGCCACUCCGUUCUAGUUA   127 Target Full Sequence	2.0	Sequence 7811 from Patent EP2985353	NA	coding protein	psRNATarget
JB170147.1	ncRNA:23   AACCUCGGUAAGGCAAGAUCAAG   1   |||||||||*||||||||||||* targets:105   UUGGAGCCACUCCGUUCUAGUUA   127 Target Full Sequence	2.0	Sequence 7811 from Patent EP2559767	NA	coding protein	psRNATarget
HI409686.1	ncRNA:23   AACCUCGGUAAGGCAAGAUCAAG   1   |||||||||*||||||||||||* targets:105   UUGGAGCCACUCCGUUCUAGUUA   127 Target Full Sequence	2.0	Sequence 7811 from Patent EP2074227	NA	coding protein	psRNATarget
LQ240756.1	ncRNA:23   AACCUCGGUAAGGCAAGAUCAAG   1   |||||||*|*||||||||||||= targets:137   UUGGAGCGACUCCGUUCUAGUUU   159 Target Full Sequence	3.0	Sequence 6751 from Patent EP2985353	NA	coding protein	psRNATarget
HI408626.1	ncRNA:23   AACCUCGGUAAGGCAAGAUCAAG   1   |||||||*|*||||||||||||= targets:137   UUGGAGCGACUCCGUUCUAGUUU   159 Target Full Sequence	3.0	Sequence 6751 from Patent EP2074227	NA	coding protein	psRNATarget
JB169087.1	ncRNA:23   AACCUCGGUAAGGCAAGAUCAAG   1   |||||||*|*||||||||||||= targets:137   UUGGAGCGACUCCGUUCUAGUUU   159 Target Full Sequence	3.0	Sequence 6751 from Patent EP2559767	NA	coding protein	psRNATarget
BT084215.2	ncRNA:23   AACCUCGGUAAGGCAAGAUCAAG   1   *|*|||||=*||||||||||||* targets:1135   AUAGAGCCGCUCCGUUCUAGUUA   1157 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0090B20 mRNA, complete cds	NA	coding protein	psRNATarget