| ncRNA ID | osa-miR5337b |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr3:35885481-35885724 [-] |
| Reference genome | MSU7 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 11 - CUAGAACGGCAAGCAAUUUGA - 31 |
| Stem-loop(if miRNA) |
- - A - ACU CA C UUUUCAC C U G GCAAUAUA AUGGAAGUAUUUCUCAUGG CCUC CAUUUCAAAUU CUUGUCGUUCUAGCUUUG CC AGUCAAA UUU UAU CAUC AUUU UGGAAAUUCGUGUAG UUAACAU UAUU U |||| ||||||||||| |||||||||||||||||| || ||||||| ||| ||| |||| |||| ||||||||||||||| ||||||| |||| GGGG GUAAAGUUUAA GAACGGCAAGAUCGAAAC GG UUAGUUU AAA AUA GUAG UGAA AUCUUUAAGUAUAUC AAUUGUA GUAU G A A C A -AU AC U ----CUU U C A -------- UCCAAAUACAAAAAUCUAA |
| Stem-loop sequence | CCUCCAUUUCAAAUUACUUGUCGUUCUAGCUUUGCCACUAGUCAAACAUUUCUAUUUUUCACCAUCCAUUUUUGGAAAUUCGUGUAGGUUAACAUGCAAUAUAUAUUAUGGAAGUAUUUCUCAUGGUGAAUCUAAAAACAUAAACCUUAUGAUGUUAAACUAUAUGAAUUUCUACAAGUUGAUGUUCAUAUAAACAUUUGAUUUAGGACAAAGCUAGAACGGCAAGCAAUUUGAAAUGAGGGGA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AK288313.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J090021D10, full insert sequence | NA | coding protein | psRNATarget |
| 1 | PMID:22585409
"Novel miRNAs in the control of arsenite levels in rice"; Liu Q; Funct Integr Genomics. 12:649-658(2012). |