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BaseInfo

ncRNA ID novel_zma_miR564
Species Zea mays
Class miRNA
Genome position Chr8:36200248-36200328 [-]
Reference genome RefGen_v4
Source SRR2089709;SRR2089711;SRR2089712;SRR2089714;SRR2287031;SRR2287160;SRR5451003;SRR5451004;SRR5451005;SRR1997866;SRR2089698;SRR2089699;SRR2089700;SRR2089701;SRR2089703;SRR2089704;SRR2089705;SRR2089707
Length 24
Mature sequence(if miRNA) 1 - ACCUAGAACACUCGGCAAAGACGU - 24
Stem-loop(if miRNA) --U                                 U  U
   UCUUUGCCGAGUGUUUUAGGUGACACUCGGCAA GG A
   ||||||||||||||||||||||||||||||||| || U
   AGAAACGGCUCACAAGAUCCACUGUGAGCCGUU CU G
UGC                                 U  U
Stem-loop sequence UUCUUUGCCGAGUGUUUUAGGUGACACUCGGCAAUGGUAUGUUCUUUGCCGAGUGUCACCUAGAACACUCGGCAAAGACGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU974507.1
ncRNA:24   UGC-A---GAAACGGCUCACAAGAUCCA   1
  |||-|---=|||||||||||||||||||
targets:524   ACGGUGACUUUUGCCGAGUGUUCUAGGU   551

0.0 Zea mays clone 451014 hypothetical protein mRNA, complete cds NA coding protein psRNATarget