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BaseInfo

ncRNA ID	novel_zma_miR556
Species	Zea mays
Class	miRNA
Genome position	Chr8:82532293-82532369 [-]
Reference genome	RefGen_v4
Source	SRR2089709;SRR2089711;SRR2089712;SRR2089713;SRR2089714;SRR2089715;SRR2287162;SRR5451006;SRR2089704;SRR2089705;SRR2089706;SRR2089707;SRR2089708
Length	24
Mature sequence(if miRNA)	1 - GGGGCGGACUGUCCGCGGCCUGAG - 24
Stem-loop(if miRNA)	--    G -            GG   G    -   - CG G   CGGG C CGGACGGUCCGC  CCU GUGC GAG G  C G   |||| | ||||||||||||  ||| |||| ||| |  |   GUCC G GCCUGUCAGGCG  GGG CGCG CUC C  G U GA    G C            --   A    U   U AU G
Stem-loop sequence	CGGGGCCGGACGGUCCGCGGCCUGGUGCGAGGCGCGGUGGUACUCUCUGCGCAGGGGCGGACUGUCCGCGGCCUGAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT088349.1	ncRNA:24   GAGUCCGGCGCCUGUCAGGCGGGG   1   |||||||||||||||||||||||| targets:1264   CUCAGGCCGCGGACAGUCCGCCCC   1287 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFc0151F11 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001196968.1	ncRNA:24   GAGUCCGGCGCCUGUCAGGCGGGG   1   |||||||||||||||||||||||| targets:1264   CUCAGGCCGCGGACAGUCCGCCCC   1287 Target Full Sequence	0.0	Zea mays uncharacterized LOC100502490 (LOC100502490), mRNA	NA	coding protein	psRNATarget
XM_020539115.1	ncRNA:24   GAGUCCGGCGCCUGUCAGGCGGGG   1   |*|||||||||||||||||||||| targets:2707   CCCAGGCCGCGGACAGUCCGCCCC   2730 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC100384241 (gpm299b), transcript variant X7, mRNA	NA	coding protein	psRNATarget
EZ049944.1	ncRNA:24   GAGUCCGGCGCCUGUCAGGCGGGG   1   **|=*|||||||=||||||||||* targets:286   GACGCGCCGCGGGCAGUCCGCCCG   309 Target Full Sequence	2.5	TSA: Zea mays contig51062, mRNA sequence	NA	coding protein	psRNATarget