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BaseInfo

ncRNA ID novel_zma_miR552
Species Zea mays
Class miRNA
Genome position Chr8:88653079-88653214 [-]
Reference genome RefGen_v4
Source SRR2089709;SRR2089710;SRR2089713;SRR2089714;SRR2647221;SRR5099742;SRR5100248;SRR5451006;SRR2089698;SRR2089699;SRR2089700;SRR2089702;SRR2089703;SRR2089706;SRR2089707
Length 21
Mature sequence(if miRNA) 116 - UUUGGAUCUAGAAUCAAAGGC - 136
Stem-loop(if miRNA) --                                      ----A   G CACCGCACCAGAUCACCAGG
  UUUGGAUCUAGAAUCAAAGGCUAAUUUUAAUCUCACCU     ACC C                    A
  ||||||||||||||||||||||||||||||||||||||     ||| |                    G
  AAACCUAGGUCUUAGUUUCCGAUUAGAAUUAGGGUGGA     AGA A                    G
GG                                      CUAUU   - CACAAAAAAGAUUUCUUGGG
Stem-loop sequence UUUGGAUCUAGAAUCAAAGGCUAAUUUUAAUCUCACCUAACCGCCACCGCACCAGAUCACCAGGAGGGGGUUCUUUAGAAAAAACACAAGAUUAUCAGGUGGGAUUAAGAUUAGCCUUUGAUUCUGGAUCCAAAGG