| ncRNA ID | novel_zma_miR548 |
| Species | Zea mays |
| Class | miRNA |
| Genome position | Chr1:186378406-186378538 [+] |
| Reference genome | RefGen_v4 |
| Source | SRR2089709;SRR2089714;SRR2089700;SRR2089706;SRR2089708 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AAGGGUGUGUUCGUUUGUUCCGGA - 24 |
| Stem-loop(if miRNA) |
--A C GAACCAU A UA CCAA --ACCAA U - UA AGGGUGUGUUCGUUUGUUC G G CC GAA UCCA GAA GCUUAU C A ||||||||||||||||||| | | || ||| |||| ||| |||||| | UCUCACGCAAGCAAACAAG C C GG CUU AGGU UUU CGAAUA G U CAA U -AUAACU C UC ACCA CCACUAG - U UU |
| Stem-loop sequence | AAGGGUGUGUUCGUUUGUUCCGGAACCAUGACCUAGAACCAAUCCAACCAAGAAUGCUUAUCUAAUUUGUAUAAGCUUUGAUCACCUGGAACCAUUCCUGGCCUCAAUACUGAACAAACGAACGCACUCUAAC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AY109256.1 |
|
1.5 | Zea mays PCO124672 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
| XM_008651541.2 |
|
1.5 | PREDICTED: Zea mays probable LRR receptor-like serine/threonine-protein kinase IRK (LOC103630489), mRNA | NA | coding protein | psRNATarget | |||||||||
| AY112165.1 |
|
1.0 | Zea mays CL13614_1 mRNA sequence | NA | coding protein | psRNATarget |