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BaseInfo

ncRNA ID	novel_zma_miR544
Species	Zea mays
Class	miRNA
Genome position	Chr1:185537265-185537318 [+]
Reference genome	RefGen_v4
Source	SRR2089709;SRR2089712;SRR5451005;SRR2089706;SRR2089708
Length	24
Mature sequence(if miRNA)	1 - CACUCGACAAAGAACCUAAGCCGG - 24
Stem-loop(if miRNA)	--      A      A C  AG  GGU   CACUCG CAAAGA C UA  CC   G   |||||| |||||| | ||  ||   GUGAGC GUUUCU G GU  GG   C UU      C      C U  CU  ACC
Stem-loop sequence	CACUCGACAAAGAACCUAAGCCGGUGCCCAGGUCUGUGCUCUUUGCCGAGUGUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ238815.1	ncRNA:24   GGCCGAAUCCAAGAAACAGCUCAC   1   ||||=*|||||||||||*|||||| targets:36   CCGGUAUAGGUUCUUUGCCGAGUG   59 Target Full Sequence	2.5	Sequence 4810 from Patent EP2985353	NA	coding protein	psRNATarget
JB167146.1	ncRNA:24   GGCCGAAUCCAAGAAACAGCUCAC   1   ||||=*|||||||||||*|||||| targets:36   CCGGUAUAGGUUCUUUGCCGAGUG   59 Target Full Sequence	2.5	Sequence 4810 from Patent EP2559767	NA	coding protein	psRNATarget
HI406685.1	ncRNA:24   GGCCGAAUCCAAGAAACAGCUCAC   1   ||||=*|||||||||||*|||||| targets:36   CCGGUAUAGGUUCUUUGCCGAGUG   59 Target Full Sequence	2.5	Sequence 4810 from Patent EP2074227	NA	coding protein	psRNATarget
JB167423.1	ncRNA:24   GGCCGAAUCCAAGAAACAGCUCAC   1   ||||=*|||||||||||*|||||| targets:173   CCGGUAUAGGUUCUUUGCCGAGUG   196 Target Full Sequence	2.5	Sequence 5087 from Patent EP2559767	NA	coding protein	psRNATarget
HI406962.1	ncRNA:24   GGCCGAAUCCAAGAAACAGCUCAC   1   ||||=*|||||||||||*|||||| targets:173   CCGGUAUAGGUUCUUUGCCGAGUG   196 Target Full Sequence	2.5	Sequence 5087 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239092.1	ncRNA:24   GGCCGAAUCCAAGAAACAGCUCAC   1   ||||=*|||||||||||*|||||| targets:173   CCGGUAUAGGUUCUUUGCCGAGUG   196 Target Full Sequence	2.5	Sequence 5087 from Patent EP2985353	NA	coding protein	psRNATarget
LQ240695.1	ncRNA:20   GAAUCCAAGAAACAGCUCAC   1   |||||||||||||*|||||| targets:1   CUUAGGUUCUUUGCCGAGUG   20 Target Full Sequence	1.5	Sequence 6690 from Patent EP2985353	NA	coding protein	psRNATarget
JB169026.1	ncRNA:20   GAAUCCAAGAAACAGCUCAC   1   |||||||||||||*|||||| targets:1   CUUAGGUUCUUUGCCGAGUG   20 Target Full Sequence	1.5	Sequence 6690 from Patent EP2559767	NA	coding protein	psRNATarget
HI408565.1	ncRNA:20   GAAUCCAAGAAACAGCUCAC   1   |||||||||||||*|||||| targets:1   CUUAGGUUCUUUGCCGAGUG   20 Target Full Sequence	1.5	Sequence 6690 from Patent EP2074227	NA	coding protein	psRNATarget