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BaseInfo

ncRNA ID novel_zma_miR542
Species Zea mays
Class miRNA
Genome position Chr8:113628331-113628503 [-]
Reference genome RefGen_v4
Source SRR2089709;SRR2089712
Length 24
Mature sequence(if miRNA) 150 - UGUACUGACACUCGGCAAAGAAGC - 173
Stem-loop(if miRNA) -- G  C  A                 CU   --U      -  UUACC -     ----  CG   AGAGUAUUAGGUGGAACUAGACAAAC
  U UA UG CACUCGGCAAAGAAGCU  GCG   GGGCUC CU     A GUUCC    UU  GUG                          G
  | || || |||||||||||||||||  |||   |||||| ||     | |||||    ||  |||                          C
  G AU AC GUGAGCCGUUUCUUUGA  UGU   CCCGGG GA     C AGGGA    GC  UCA                          U
GA G  C  -                 -C   UUU      C  --CAA U     AACA  --   CUGACGGCCUGAUCGUGAGCCGUCCC
Stem-loop sequence UGUACUGACACUCGGCAAAGAAGCUCUGCGUGGGCUCCUUUACCAGUUCCUUCGGUGAGAGUAUUAGGUGGAACUAGACAAACGCUCCCUGCCGAGUGCUAGUCCGGCAGUCACUCGACAAAGGGAUCAACAGCGGGCCCUUUUGUCAGUUUCUUUGCCGAGUGCACUAGGAG