| ncRNA ID | novel_zma_miR535 |
| Species | Zea mays |
| Class | miRNA |
| Genome position | Chr8:134429412-134429579 [-] |
| Reference genome | RefGen_v4 |
| Source | SRR2089709;SRR2089710;SRR2089711;SRR2089712;SRR2089715;SRR5451003;SRR2089698;SRR2089701;SRR2089706;SRR2089708 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - GCCUUAUAUAGUGGGACGGAGGGA - 24 |
| Stem-loop(if miRNA) |
-- GG UA UU UC CAAUAUAAG ---GCUC A - A CCUCCGUCUCA AUAUAAGGCGUAACCACUUUU UUC G CCA GCGU UCUCUAUGC UAC GUAU U ||||||||||| ||||||||||||||||||||| ||| | ||| |||| ||||||||| ||| |||| GGAGGCAGGGU UAUAUUCCGCAUUGGUGGAGA AAG U GGU CGUA AGAGAUAUG GUG CGUA C AG GA CC UU CU ---UCUUUA AAUUAAC - A G |
| Stem-loop sequence | CCUCCGUCUCAGGAUAUAAGGCGUAACCACUUUUUAUUCUUGUCCCACAAUAUAAGGCGUGCUCUCUCUAUGCAUACGUAUAUCGAUGCAGUGGUAUAGAGACAAUUAAAUGCAUUUCUUGGUCUUUGAACCAGAGGUGGUUACGCCUUAUAUAGUGGGACGGAGGGA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EU974289.1 |
|
1.5 | Zea mays clone 445101 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
| XM_020546407.1 |
|
2.5 | PREDICTED: Zea mays zinc finger BED domain-containing protein DAYSLEEPER-like (LOC109943429), mRNA | NA | coding protein | psRNATarget |