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BaseInfo

ncRNA ID	novel_zma_miR531
Species	Zea mays
Class	miRNA
Genome position	Chr1:174978358-174978429 [+]
Reference genome	RefGen_v4
Source	SRR2089709;SRR2089699;SRR2089706;SRR2089708
Length	24
Mature sequence(if miRNA)	49 - CGGUUUUCUAACCGUGUCUGGCGG - 72
Stem-loop(if miRNA)	--       U   A         AA   -C  A  GC   GCCAGAC CGG UAGGAAAUU  GCC  GC UG  U   ||||||| ||| |||||||||  |||  || ||   CGGUCUG GCC AUCUUUUGG  CGG  CG GC  A GG       U   A         CC   CU  -  AA
Stem-loop sequence	GCCAGACUCGGAUAGGAAAUUAAGCCCGCAUGGCUAAACGGCUCGGCCCGGUUUUCUAACCGUGUCUGGCGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008682038.1	ncRNA:24   GGCGGUCUGUGCCAAUCUUUUGGC   1   |||||||=|||||||||||||||| targets:270   CCGCCAGGCACGGUUAGAAAACCG   293 Target Full Sequence	1.0	PREDICTED: Zea mays ras-related protein Rab-36-like (LOC103655257), mRNA	NA	coding protein	psRNATarget
EU957132.1	ncRNA:24   GGCGGUCUGUGCCAAUCUUUUGGC   1   =|||||||||||||||||||||=| targets:489   UCGCCAGACACGGUUAGAAAACUG   512 Target Full Sequence	1.5	Zea mays clone 1583769 mRNA sequence	NA	coding protein	psRNATarget
XM_008660413.2	ncRNA:24   GGCGGUCUGUGCCAAUCUUUUGGC   1   ||||*||=||||||||*||||||| targets:666   CCGCAAGGCACGGUUAAAAAACCG   689 Target Full Sequence	2.5	PREDICTED: Zea mays phosphomevalonate kinase (LOC100282968), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008660412.2	ncRNA:24   GGCGGUCUGUGCCAAUCUUUUGGC   1   ||||*||=||||||||*||||||| targets:662   CCGCAAGGCACGGUUAAAAAACCG   685 Target Full Sequence	2.5	PREDICTED: Zea mays phosphomevalonate kinase (LOC100282968), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008660414.2	ncRNA:24   GGCGGUCUGUGCCAAUCUUUUGGC   1   ||||*||=||||||||*||||||| targets:668   CCGCAAGGCACGGUUAAAAAACCG   691 Target Full Sequence	2.5	PREDICTED: Zea mays phosphomevalonate kinase (LOC100282968), transcript variant X3, mRNA	NA	coding protein	psRNATarget