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BaseInfo

ncRNA ID novel_zma_miR527
Species Zea mays
Class miRNA
Genome position Chr8:152709511-152709598 [-]
Reference genome RefGen_v4
Source SRR2089709
Length 21
Mature sequence(if miRNA) 68 - AGCUGCCGACUCAUCCAUUCA - 88
Stem-loop(if miRNA) --    G   AC          AC         A   U  G AAG
  AGCU CCG  UCAUCCAUUC  CUGCCAAGA CCA GG C   C
  |||| |||  ||||||||||  ||||||||| ||| || |
  UCGA GGC  GGUGGGUGAG  GAUGGUUCU GGU CU G   G
AA    G   GC          CC         -   -  G AUG
Stem-loop sequence AGCUGCCGACUCAUCCAUUCACCUGCCAAGAACCAUGGGCAAGCGGUAGGUCUGGUCUUGGUAGCCGAGUGGGUGGCGCGGGAGCUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB169126.1
ncRNA:21   ACUUACCUACUCAGCCGUCGA   1
  ||==||*||||||||||||||
targets:115   UGGGUGAAUGAGUCGGCAGCU   135

3.0 Sequence 6790 from Patent EP2559767 NA coding protein psRNATarget
HI408665.1
ncRNA:21   ACUUACCUACUCAGCCGUCGA   1
  ||==||*||||||||||||||
targets:115   UGGGUGAAUGAGUCGGCAGCU   135

3.0 Sequence 6790 from Patent EP2074227 NA coding protein psRNATarget
LQ240795.1
ncRNA:21   ACUUACCUACUCAGCCGUCGA   1
  ||==||*||||||||||||||
targets:115   UGGGUGAAUGAGUCGGCAGCU   135

3.0 Sequence 6790 from Patent EP2985353 NA coding protein psRNATarget