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BaseInfo

ncRNA ID novel_zma_miR526
Species Zea mays
Class miRNA
Genome position Chr8:157426525-157426628 [-]
Reference genome RefGen_v4
Source SRR2089709;SRR2287160;SRR2287163;SRR2089699;SRR2089706
Length 24
Mature sequence(if miRNA) 1 - GCUCGGACAAGAAAUUAGGCACGG - 24
Stem-loop(if miRNA) -GU       -G  CG        UC  UA  G CCA    UAUG      CG
   UGUUUAG  UC  GUCCGAGC  GG  CG U   GUUC    CGGGCC  G
   |||||||  ||  ||||||||  ||  || |   ||||    ||||||
   ACGGAUU  AG  CAGGCUCG  CC  GC A   UAAG    GCCCGG  G
GGC       AA  AA        GA  GG  G --A    CACA      UU
Stem-loop sequence GUUGUUUAGGUCCGGUCCGAGCUCGGUACGGUCCAGUUCUAUGCGGGCCCGGGUUGGCCCGACACGAAUAAGCGGGCCAGGCUCGGACAAGAAAUUAGGCACGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ072191.1
ncRNA:24   GGCACGGAUUAAAGAACAGGCUCG   1
  ||||||||||||||*|||||||||
targets:50   CCGUGCCUAAUUUCCUGUCCGAGC   73

1.5 TSA: Zea mays contig07828, mRNA sequence NA coding protein psRNATarget
EZ105062.1
ncRNA:24   GGCACGGAUUAAAGAACAGGCUCG   1
  *||*||=*||||||||||||||||
targets:86   GCGGGCUCAAUUUCUUGUCCGAGC   109

2.0 TSA: Zea mays contig40719, mRNA sequence NA coding protein psRNATarget