ncRNA ID | novel_zma_miR526 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr8:157426525-157426628 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089709;SRR2287160;SRR2287163;SRR2089699;SRR2089706 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GCUCGGACAAGAAAUUAGGCACGG - 24 |
Stem-loop(if miRNA) |
-GU       -G  CG        UC  UA  G CCA    UAUG      CG    UGUUUAG  UC  GUCCGAGC  GG  CG U   GUUC    CGGGCC  G    |||||||  ||  ||||||||  ||  || |   ||||    ||||||    ACGGAUU  AG  CAGGCUCG  CC  GC A   UAAG    GCCCGG  G GGC       AA  AA        GA  GG  G --A    CACA      UU |
Stem-loop sequence | GUUGUUUAGGUCCGGUCCGAGCUCGGUACGGUCCAGUUCUAUGCGGGCCCGGGUUGGCCCGACACGAAUAAGCGGGCCAGGCUCGGACAAGAAAUUAGGCACGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ072191.1 |
|
1.5 | TSA: Zea mays contig07828, mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EZ105062.1 |
|
2.0 | TSA: Zea mays contig40719, mRNA sequence | NA | coding protein | psRNATarget |