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BaseInfo

ncRNA ID	novel_zma_miR516
Species	Zea mays
Class	miRNA
Genome position	Chr8:178522039-178522086 [-]
Reference genome	RefGen_v4
Source	SRR2089709;SRR2089713;SRR2287031;SRR2287164;SRR2089698;SRR2089701;SRR2089708
Length	24
Mature sequence(if miRNA)	25 - ACGGGUACGGGUUUGGGAUGGCAA - 48
Stem-loop(if miRNA)	--               GGA   CA   ACGGGUACGGGUUUG   UGG  A   |||||||||||||||   |||   UGCUCAUGUUUAAGC   ACC  A GU               --A   CA
Stem-loop sequence	ACGGGUACGGGUUUGGGAUGGCAAAACCCAACGAAUUUGUACUCGUUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI405972.1	ncRNA:24   AACGGUAGGGUUUGGGCAUGGGCA   1   |||||=|||||||||||||||||| targets:6   UUGCCGUCCCAAACCCGUACCCGU   29 Target Full Sequence	1.0	Sequence 4097 from Patent EP2074227	NA	coding protein	psRNATarget
JB166433.1	ncRNA:24   AACGGUAGGGUUUGGGCAUGGGCA   1   |||||=|||||||||||||||||| targets:6   UUGCCGUCCCAAACCCGUACCCGU   29 Target Full Sequence	1.0	Sequence 4097 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238102.1	ncRNA:24   AACGGUAGGGUUUGGGCAUGGGCA   1   |||||=|||||||||||||||||| targets:6   UUGCCGUCCCAAACCCGUACCCGU   29 Target Full Sequence	1.0	Sequence 4097 from Patent EP2985353	NA	coding protein	psRNATarget
XM_008667280.2	ncRNA:24   AACGGUAGGGUUUGGGCAUGGGCA   1   |||||=|||||||||||||||||| targets:1070   UUGCCGUCCCAAACCCGUACCCGU   1093 Target Full Sequence	1.0	PREDICTED: Zea mays hypothetical protein (LOC100276571), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008667278.2	ncRNA:24   AACGGUAGGGUUUGGGCAUGGGCA   1   |||||=|||||||||||||||||| targets:1074   UUGCCGUCCCAAACCCGUACCCGU   1097 Target Full Sequence	1.0	PREDICTED: Zea mays hypothetical protein (LOC100276571), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020549356.1	ncRNA:24   AACGGUAGGGUUUGGGCAUGGGCA   1   |||||=|||||||||||||||||| targets:1590   UUGCCGUCCCAAACCCGUACCCGU   1613 Target Full Sequence	1.0	PREDICTED: Zea mays UDP-glycosyltransferase 90A1 (LOC103649130), mRNA	NA	coding protein	psRNATarget
BT042623.2	ncRNA:24   AACGGUAGGGUUUGGGCAUGGGCA   1   |||==||||||||||||||||||| targets:285   UUGUUAUCCCAAACCCGUACCCGU   308 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0377K06 mRNA, complete cds	NA	coding protein	psRNATarget