Search result

BaseInfo

ncRNA ID novel_zma_miR510
Species Zea mays
Class miRNA
Genome position Chr4:89511771-89511828 [+]
Reference genome RefGen_v4
Source SRR1583943;SRR2647221
Length 24
Mature sequence(if miRNA) 35 - GUCGAGUGCCCGAAAUAAAACACU - 58
Stem-loop(if miRNA) --G     -UUGA U              A
   GUUUU     G GGCACUCGGCAAAG G
   |||||     | ||||||||||||||
   CAAAA     C CCGUGAGCUGUUUC C
UCA     UAAAG -              U
Stem-loop sequence GGUUUUUUGAGUGGCACUCGGCAAAGAGCUCUUUGUCGAGUGCCCGAAAUAAAACACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI406693.1
ncRNA:20   AAAAUAAAGCCCGUGAGCUG   1
  ||||*|||||||||||||=|
targets:1   UUUUUUUUCGGGCACUCGGC   20

2.5 Sequence 4818 from Patent EP2074227 NA coding protein psRNATarget
LQ238823.1
ncRNA:20   AAAAUAAAGCCCGUGAGCUG   1
  ||||*|||||||||||||=|
targets:1   UUUUUUUUCGGGCACUCGGC   20

2.5 Sequence 4818 from Patent EP2985353 NA coding protein psRNATarget
JB167154.1
ncRNA:20   AAAAUAAAGCCCGUGAGCUG   1
  ||||*|||||||||||||=|
targets:1   UUUUUUUUCGGGCACUCGGC   20

2.5 Sequence 4818 from Patent EP2559767 NA coding protein psRNATarget