ncRNA ID | osa-miR1865-3p |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr3:34000594-34000737 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 111 - CGAAGAAUCGCAGUCACUAGUUGU - 134 |
Stem-loop(if miRNA) |
--C     C   U         G              CA  A  C       U UG    ---        -  G    UCGAA UAC GCUAGUGAU GUGAUUCUUCGACA  GU UU GGCGAGU U  GGCU   UCAUCAUG CG U    ||||| ||| ||||||||| ||||||||||||||  || || ||||||| |  ||||   |||||||| || G    AGUUU AUG UGAUCACUG CGCUAAGAAGCUGU  CA AA CCGUUCA A  CCGA   AGUGGUAC GC C CUC     A   U         A              --  G  A       - GU    AGC        A  U |
Stem-loop sequence | CUCGAACUACUGCUAGUGAUGGUGAUUCUUCGACACAGUAUUCGGCGAGUUUUGGGCUUCAUCAUGCGGUGCUCGACAUGGUGACGAAGCCUGAACUUGCCAAAGACUGUCGAAGAAUCGCAGUCACUAGUUGUAAUUUGACUC |
1 | PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains"; Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C; Genome Res. 18:1456-1465(2008). |