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BaseInfo

ncRNA ID	novel_zma_miR507
Species	Zea mays
Class	miRNA
Genome position	Chr8:168210947-168211006 [+]
Reference genome	RefGen_v4
Source	SRR2089709;SRR2089710;SRR2089712;SRR2089714;SRR2089715;SRR2287159;SRR2287160;SRR5451003;SRR5451004;SRR5451005;SRR5451006;SRR2089698;SRR2089699;SRR2089700;SRR2089702;SRR2089703;SRR2089704;SRR2089705;SRR2089706;SRR2089707;SRR2089708
Length	24
Mature sequence(if miRNA)	37 - AUCUGGUGCACAUAGAAGAUUGGU - 60
Stem-loop(if miRNA)	--    G   C                  C   CAAU UUC AUGUGCACCAGAUAUGUC G   |||| ||| ||||||||||||||||||   GUUA AAG UACACGUGGUCUAUACAG G UG    G   A                  G
Stem-loop sequence	CAAUGUUCCAUGUGCACCAGAUAUGUCCGGGGACAUAUCUGGUGCACAUAGAAGAUUGGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB163459.1	ncRNA:24   UGGUUAGAAGAUACACGUGGUCUA   1   |||||||||||||||||||=|||| targets:233   ACCAAUCUUCUAUGUGCACUAGAU   256 Target Full Sequence	1.5	Sequence 1123 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235128.1	ncRNA:24   UGGUUAGAAGAUACACGUGGUCUA   1   |||||||||||||||||||=|||| targets:233   ACCAAUCUUCUAUGUGCACUAGAU   256 Target Full Sequence	1.5	Sequence 1123 from Patent EP2985353	NA	coding protein	psRNATarget
HI402998.1	ncRNA:24   UGGUUAGAAGAUACACGUGGUCUA   1   |||||||||||||||||||=|||| targets:233   ACCAAUCUUCUAUGUGCACUAGAU   256 Target Full Sequence	1.5	Sequence 1123 from Patent EP2074227	NA	coding protein	psRNATarget
XM_020552764.1	ncRNA:24   UGGUUAGAAGAUACACGUGGUCUA   1   ||||=|||||||||||=||||||| targets:3127   ACCAGUCUUCUAUGUGUACCAGAU   3150 Target Full Sequence	1.5	PREDICTED: Zea mays probable serine/threonine-protein kinase WNK8 (LOC103654279), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008681116.2	ncRNA:24   UGGUUAGAAGAUACACGUGGUCUA   1   ||||=|||||||||||=||||||| targets:3305   ACCAGUCUUCUAUGUGUACCAGAU   3328 Target Full Sequence	1.5	PREDICTED: Zea mays probable serine/threonine-protein kinase WNK8 (LOC103654279), transcript variant X1, mRNA	NA	coding protein	psRNATarget
LQ235335.1	ncRNA:24   UGGUUAGAAGAUACACGUGGUCUA   1   ||||||*||||||||*|||||||| targets:54   ACCAAUAUUCUAUGUACACCAGAU   77 Target Full Sequence	2.5	Sequence 1330 from Patent EP2985353	NA	coding protein	psRNATarget
HI403205.1	ncRNA:24   UGGUUAGAAGAUACACGUGGUCUA   1   ||||||*||||||||*|||||||| targets:54   ACCAAUAUUCUAUGUACACCAGAU   77 Target Full Sequence	2.5	Sequence 1330 from Patent EP2074227	NA	coding protein	psRNATarget
JB163666.1	ncRNA:24   UGGUUAGAAGAUACACGUGGUCUA   1   ||||||*||||||||*|||||||| targets:54   ACCAAUAUUCUAUGUACACCAGAU   77 Target Full Sequence	2.5	Sequence 1330 from Patent EP2559767	NA	coding protein	psRNATarget
BT087210.1	ncRNA:24   UGGUUAGAAGAUACACGUGGUCUA   1   |||||||*||*||||||||||||| targets:507   ACCAAUCCUCCAUGUGCACCAGAU   530 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFc0076O09 mRNA, complete cds	NA	coding protein	psRNATarget
BT041325.1	ncRNA:24   UGGUUAGAAGAUACACGUGGUCUA   1   |||||||*||*||||||||||||| targets:1276   ACCAAUCCUCCAUGUGCACCAGAU   1299 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0204C02 mRNA, complete cds	NA	coding protein	psRNATarget