Search result

BaseInfo

ncRNA ID	novel_zma_miR498
Species	Zea mays
Class	miRNA
Genome position	Chr8:141752014-141752208 [+]
Reference genome	RefGen_v4
Source	SRR2089709;SRR5451006;SRR2089703
Length	24
Mature sequence(if miRNA)	1 - AAACCGGAGGGAAUUGAAGGGGCU - 24
Stem-loop(if miRNA)	--             -UU  ----------A GG   AAAAUCUCCCUCUUAUUCAAUUGGUAACCUUAAACCCCCUUCGGGAUUGGAGGGAAUUGAGGUGGAA   AAACCGGAGGGAA   GA           G  GCU                                                                   A   |||||||||||||   ||           |  |||   UUUGGCCUCUCUU   CU           G  GGA                                                                   U GU             UAU  CCGCAAUCUUA --   AGAAUCCCGAUCAAACCUUUGAUUUUAGAGGAAACCCUAACUUCCUCUAACCCUUCCUUUAAUCAAG
Stem-loop sequence	AAACCGGAGGGAAUUGAAGGGGCUAAAAUCUCCCUCUUAUUCAAUUGGUAACCUUAAACCCCCUUCGGGAUUGGAGGGAAUUGAGGUGGAAAUGAACUAAUUUCCUUCCCAAUCUCCUUCAAUCCCAAAGGAGAUUUUAGUUUCCAAACUAGCCCUAAGAAGGGAUUCUAACGCCUCUAUUUCUCUCCGGUUUUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008654495.2	ncRNA:24   UCGGGGAAGUUAAGGGAGGCCAAA   1   ||||||||||||*||||||||||| targets:1114   AGCCCCUUCAAUCCCCUCCGGUUU   1137 Target Full Sequence	1.5	PREDICTED: Zea mays probable GMP synthase [glutamine-hydrolyzing] (LOC103632764), mRNA	NA	coding protein	psRNATarget