ncRNA ID | novel_zma_miR497 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr8:139833815-139833874 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089709;SRR2089711;SRR2089712;SRR2089713;SRR2089715;SRR1997865;SRR1997866;SRR2089700;SRR2089701;SRR2089705;SRR2089706 |
Length | 22 |
Mature sequence(if miRNA) | 39 - CCUGAUGACAUCUGAGUCGGUG - 60 |
Stem-loop(if miRNA) |
CU    A  U     CAG  G  GCC    A   CACC GG CUCGG   GU GU   GGCG G   |||| || |||||   || ||   |||| G   GUGG CU GAGUC   CA UA   CCGC A --    -  -     -UA  G  GUC    A |
Stem-loop sequence | CUCACCAGGUCUCGGCAGGUGGUGCCGGCGAGGAACGCCCUGAUGACAUCUGAGUCGGUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008661030.2 |
|
2.5 | PREDICTED: Zea mays subtilisin-like protease SBT6.1 (LOC103638020), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_008661029.2 |
|
2.5 | PREDICTED: Zea mays subtilisin-like protease SBT6.1 (LOC103638020), transcript variant X1, mRNA | NA | coding protein | psRNATarget |