ncRNA ID | novel_zma_miR495 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr8:126987691-126987757 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089709;SRR2089714;SRR2287162;SRR1997865;SRR5451004;SRR5451005;SRR1997866;SRR2089698;SRR2089702;SRR2089703 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GCUCUCUGCGGAGGCGUGGACGGU - 24 |
Stem-loop(if miRNA) |
--      U  GG   -       G  CCG    A   GCUCUC GC  AGG CGUGGAC GU   CGGC C   |||||| ||  ||| ||||||| ||   |||| A   CGAGAG UG  UCC GUGCCUG CA   GCCG G CA      -  GG   A       A  --A    G |
Stem-loop sequence | GCUCUCUGCGGAGGCGUGGACGGUCCGCGGCACAGGGCCGAACAGUCCGUGACCUGGGUGAGAGCAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT039435.1 |
|
1.0 | Zea mays full-length cDNA clone ZM_BFc0013G13 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_001349036.1 |
|
2.5 | Zea mays Protein NRT1/ PTR FAMILY 5.10 (LOC100382172), mRNA | NA | coding protein | psRNATarget |